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Record W2766456060 · doi:10.12705/665.10

Species delimitation in the Caribbean <i>Gesneria viridiflora</i> complex (Gesneriaceae) reveals unsuspected endemism

2017· article· en· W2766456060 on OpenAlexaff
François Lambert, John L. Clark, Simon Joly

Bibliographic record

VenueTaxon · 2017
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicPlant and Fungal Species Descriptions
Canadian institutionsEspace pour la vieUniversité de Montréal
FundersEuropean Climate, Infrastructure and Environment Executive AgencyNational Geographic Society
KeywordsSubspeciesEndemismGesneriaceaeSpecies complexTaxonomy (biology)BiodiversityBiologyBiodiversity hotspotEcologyTaxonGeographyCoalescent theoryHabitatMorphometricsPhylogenetic tree

Abstract

fetched live from OpenAlex

Abstract Accurate taxonomy and species boundaries are of great importance in biodiversity hotspots with high species endemicity like the Caribbean. Indeed, inaccurate species delimitations can affect biodiversity estimates and influence the decisions taken on conservation issues. The genera Gesneria and Rhytidophyllum constitute the main representatives of the Caribbean Gesneriaceae and contain a few complexes with unclear taxonomic boundaries that are characterized by a confusing history of taxonomic changes and by the presence of several recognized varieties and subspecies. Gesneria viridiflora is a good example of such a complex. Four geographically isolated subspecies are recognized that have similar but variable vegetative and reproductive characters, and numerous taxonomic changes have been suggested in this group over the years. In this study, we used multivariate approaches to delimit distinct clusters of individuals using morphological (qualitative and quantitative characters) and molecular data from four nuclear markers. These groups are then tested using a Bayesian coalescent species delimitation approach and compared using multivariate analyses of bioclimatic variables obtained from occurrence data. The results suggest the presence of four distinct species in this complex according to the unified species concept: G . quisqueyana , G . sintenisii , G . sylvicola and G . viridiflora . We also maintain G. viridiflora subsp. acrochordonanthe that does not fulfill our criteria for a species but that shows morphological variation associated to a specific geographical area. A distribution map, an identification key to the species, and a taxonomic treatment are provided. The new taxonomy proposed in this study shows an unsuspected species endemism in some regions of the Caribbean and underlines the importance of investigating species delimitation in diversified groups containing taxonomically complex taxa with poorly defined boundaries.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.906
Threshold uncertainty score0.495

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0010.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.059
GPT teacher head0.273
Teacher spread0.213 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations9
Published2017
Admission routes1
Has abstractyes

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