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Record W2771264917

Gene Association Studies of Clozapine Response: A Dopamine System Approach

2016· dissertation· en· W2771264917 on OpenAlexfundno aff
Eric Yi‐Hsiu Huang

Bibliographic record

VenueTSpace · 2016
Typedissertation
Languageen
FieldNeuroscience
TopicAutism Spectrum Disorder Research
Canadian institutionsnot available
FundersCanadian Institutes of Health ResearchGenentechH. Lundbeck A/SSunovionEisaiSanofiEli Lilly and CompanyGlaxoSmithKlineAmgen
KeywordsClozapineDopamine receptor D2Schizophrenia (object-oriented programming)Genetic associationGenome-wide association studyAlleleMedicineAntipsychoticCatechol-O-methyl transferasePharmacogenomicsPharmacogeneticsOncologyPharmacologyInternal medicineBioinformaticsGeneGeneticsPsychologyDopamineSingle-nucleotide polymorphismBiologyPsychiatryGenotype
DOInot available

Abstract

fetched live from OpenAlex

The antipsychotic clozapine (CLZ) is under-utilized due to its life-threatening side-effects despite superior efficacy for treatment-resistant schizophrenia (SCZ). Thus, predictors for response could help inform drug administration decisions. Given the genetic basis for response, we aimed to identify genetic predictors and build a preliminary genetic model for CLZ efficacy. Since CLZâ s targets the DA system, we investigated a DA D2 receptor (DRD2) gene variant implicated in SCZ risk in a recent genome-wide association study. We observed that the A-allele was associated with better CLZ response. We also examined the association between catechol-O-methyltransferase gene (COMT) polymorphism Val158Met and antipsychotic response, observing that Met/Met was associated with greater improvement. Lastly, we developed a genetic model for response, consisting of four polymorphisms from the DRD2, serotonin-6 receptor (5-HT6), brain-derived neurotrophic factor (BDNF), and neurexin-1 genes (NRXN1) (Adjusted R2=52%, sensitivity=70%, specificity=47%). While replication is required, our findings identify several potential genetic predictors of response.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.003
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.008
Threshold uncertainty score0.015

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0010.003
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.001
Bibliometrics0.0010.002
Science and technology studies0.0000.000
Scholarly communication0.0010.000
Open science0.0000.000
Research integrity0.0010.000
Insufficient payload (model declined to judge)0.0020.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.059
GPT teacher head0.389
Teacher spread0.330 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2016
Admission routes1
Has abstractyes

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