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Record W2771643098 · doi:10.12705/646.7

Entangled evolutionary history of <i>Cuscuta pentagona</i> clade: A story involving hybridization and Darwin in the Galapagos

2015· article· en· W2771643098 on OpenAlex

Why this work is in the frame

A frame that forgets how it found something cannot be audited. These are the routes that admitted this work.

affAt least one author lists a Canadian institution in the pinned OpenAlex snapshot.

Bibliographic record

VenueTaxon · 2015
Typearticle
Languageen
FieldAgricultural and Biological Sciences
TopicPlant Parasitism and Resistance
Canadian institutionsAmgen (Canada)University of TorontoWilfrid Laurier University
Fundersnot available
KeywordsCuscutaBiologyCladeLineage (genetic)BotanyReticulate evolutionPlant evolutionEvolutionary biologyBiological dispersalPhylogeneticsGeneticsGenomePopulationGene

Abstract

fetched live from OpenAlex

Abstract The distribution of Cuscuta subg. Grammica sect. Cleistogrammica ( Cuscuta pentagona clade) is centered in North America ( C. campestris, C. glabrior, C. harperi, C. pentagona, C. obtusiflora, C. plattensis, C. polygonorum, C. runyonii ); however, long ‐distance dispersal was documented to Hawaii ( C. sandwichiana ), South America ( C. gymnocarpa, C. stenolepis , and in part C. obtusiflora ), Africa ( C. bifurcata, C. schlechteri ), Eurasia, and Australia ( C. australis ). Hybrid speciation has already been documented for some members of sect. Cleistogrammica ( C. sandwichiana, C. bifurcata ) but previous studies strongly suggested that the extent of reticulate evolution is underestimated in Cuscuta generally, and in this section in particular. Sequence data from the nuclear internal transcribed spacer (ITS) and the plastid trnL‐F region were used to reconstruct the phylogeny and gain a better understanding of the evolutionary history within the clade. Additionally, a morphometric analysis was conducted to test the phenetic distinctiveness of a select number of species with taxonomic problems: C. campestris, C. glabrior, C. gymnocarpa , and C. pentagona . Discordances between phylogenies derived from plastid and nuclear data showed that C. campestris is a hybrid, likely involving the C. runyonii / glabrior lineage as a maternal progenitor and an undiscovered species as a paternal progenitor. This latter species, an extinct or unsampled lineage, was itself inferred to be a hybrid between C. pentagona / harperi and C. australis / obtusiflora / polygonorum lineages. Both the evolutionary and morphometric results clearly showed that C. campestris is a distinct species and the negative consequences of its amalgamation with C. pentagona during the last decades are discussed. Cuscuta gymnocarpa, an enigmatic species described from specimens collected by Darwin from the Galapagos, was inferred as conspecific with C. campestris and proposed as a variety of the latter. Because C. gymnocarpa is only a form of C. campestris , the possible means of dispersal of the latter species to the Galapagos are discussed. Cuscuta modesta , a new species discovered while studying the systematics of the clade, is described and illustrated.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.694
Threshold uncertainty score0.096

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.030
GPT teacher head0.202
Teacher spread0.172 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it