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Record W2772598231 · doi:10.1093/ije/dyx236

Assessment of moderate coffee consumption and risk of epithelial ovarian cancer: a Mendelian randomization study

2017· article· en· W2772598231 on OpenAlexfundno aff
Jue‐Sheng Ong, Liang‐Dar Hwang, Gabriel Cuéllar-Partida, Nicholas G. Martin, Georgia Chenevix‐Trench, Michael C. Quinn, Marilyn C. Cornelis, Puya Gharahkhani, Penelope M. Webb, Stuart MacGregor, Enda Bryne, Peter A. Fasching, Alexander Hein, Stefanie Burghaus, Matthias W. Beckmann, Diether Lambrechts, Els Van Nieuwenhuysen, Ignace Vergote, Adriaan Vanderstichele, Anthony J. Swerdlow, Michael E. Jones, Minouk J. Schoemaker, Digna Velez Edwards, James D. Brenton, Javier Benı́tez, Maria J. García, Cristina Rodríguez‐Antona, Mary Anne Rossing, Renée T. Fortner, Elio Ríboli, Jenny Chang‐Claude, Ursula Eilber, Shan Wang‐Gohrke, Drakoulis Yannoukakos, Marc T. Goodman, Natalia Bogdanova, Thilo Dörk, Matthias Duerst, Peter Hillemanns, Ingo B. Runnebaum, Natalia Antonenkova, Ralf Bützow, Heli Nevanlinna, Liisa M. Pelttari, Robert P. Edwards, Joseph L. Kelley, Francesmary Modugno, Kirsten B. Moysich, Roberta B. Ness, Rikki Cannioto, Florian Heitz, Beth Y. Karlan, Håkan Olsson, Susanne K. Kjær, Allan Jensen, Graham G. Giles, Fiona Bruinsma, Michelle A.T. Hildebrandt, Dong Liang, Xifeng Wu, Loı̈c Le Marchand, Veronica Wendy Setiawan, Jennifer B. Permuth, Maria Bisogna, Fanny Dao, Douglas A. Levine, Daniel W. Cramer, Kathryn L. Terry, Shelley S. Tworoger, Meir J. Stampfer, Walter Willet, Stacey A. Missmer, Line Bjørge, Reidun Kristin Kopperud, Katharina Bischof, Liv Cecilie Vestrheim Thomsen, Lambertus A. Kiemeney, Leon F.A.G. Massuger, Tanja Pejović, Angela Brooks‐Wilson, Sara H. Olson, Valerie McGuire, Joseph H. Rothstein, Weiva Sieh, Alice S. Whittemore, Linda Cook, Nhu D. Le, C. Blake Gilks, Jacek Gronwald, Anna Jakubowska, Jan Lubiński, Tomasz Kluz, Nicolas Wentzensen, Louise A. Brinton, Britton Trabert, Jolanta Lissowska, Estrid Høgdall, Claus Høgdall, Dale P. Sandler, Alicja Wolk, Jonathan P. Tyrer, Honglin Song, Diana Eccles, Ian Campbell, Rosalind Glasspool, Iain A. McNeish, James Paul, Nadeem Siddiqui, Rebecca Sutphen, Catherine Phelan, Hoda Anton‐Culver, Argyrios Ziogas, Taymaa May, Simon A. Gayther, Aleksandra Gentry‐Maharaj, Usha Menon, Susan J. Ramus, Anna H. Wu, David G. Huntsman, Anna DeFazio, Agnieszka Dansonka‐Mieszkowska, Jolanta Kupryjańczyk, Joanna Moes-Sosnowska, Lukasz M. Szafron, Julie M. Cunningham, Stacey J. Winham, Harvey A. Risch, Ellen L. Goode, Joellen M. Schildkraut, Celeste Leigh Pearce, Andrew Berchuck, Paul D.P. Pharoah

Bibliographic record

VenueInternational Journal of Epidemiology · 2017
Typearticle
Languageen
FieldMedicine
TopicCoffee research and impacts
Canadian institutionsnot available
FundersNational Cancer InstituteCancer Council TasmaniaCancer Council QueenslandCancer Council NSWCancer Council VictoriaNational Health and Medical Research CouncilMedical Research CouncilHelse VestCanadian Institutes of Health ResearchCancerfondenOvarian Cancer Research FundCancer AustraliaNational Institute for Health and Care ResearchLon V. Smith FoundationHelsingin ja Uudenmaan SairaanhoitopiiriFred C. and Katherine B. Andersen FoundationBreast Cancer NowNorges ForskningsrådUniversity of CambridgeCancer Research UKMinnesota Ovarian Cancer AllianceImperial College LondonKreftforeningenCancer Council South AustraliaDeutsches KrebsforschungszentrumRutgers Cancer Institute of New JerseyMayo Foundation for Medical Education and ResearchEuropean CommissionAustralian Research CouncilUniversität UlmOregon Health and Science UniversityQIMR Berghofer Medical Research InstituteInstitute of Cancer ResearchNational Center for Research ResourcesRoswell Park Cancer InstituteOak Foundation
KeywordsMendelian randomizationOvarian cancerMedicineOncologyRandomizationEpithelial ovarian cancerGynecologyInternal medicineEnvironmental healthBiologyCancerGeneClinical trialGeneticsGenotypeGenetic variants

Abstract

fetched live from OpenAlex

Background: Coffee consumption has been shown to be associated with various health outcomes in observational studies. However, evidence for its association with epithelial ovarian cancer (EOC) is inconsistent and it is unclear whether these associations are causal. Methods: We used single nucleotide polymorphisms associated with (i) coffee and (ii) caffeine consumption to perform Mendelian randomization (MR) on EOC risk. We conducted a two-sample MR using genetic data on 44 062 individuals of European ancestry from the Ovarian Cancer Association Consortium (OCAC), and combined instrumental variable estimates using a Wald-type ratio estimator. Results: For all EOC cases, the causal odds ratio (COR) for genetically predicted consumption of one additional cup of coffee per day was 0.92 [95% confidence interval (CI): 0.79, 1.06]. The COR was 0.90 (95% CI: 0.73, 1.10) for high-grade serous EOC. The COR for genetically predicted consumption of an additional 80 mg caffeine was 1.01 (95% CI: 0.92, 1.11) for all EOC cases and 0.90 (95% CI: 0.73, 1.10) for high-grade serous cases. Conclusions: We found no evidence indicative of a strong association between EOC risk and genetically predicted coffee or caffeine levels. However, our estimates were not statistically inconsistent with earlier observational studies and we were unable to rule out small protective associations.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.004
metaresearch head score (Gemma)0.008
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.017
Threshold uncertainty score0.931

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0040.008
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0010.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.108
GPT teacher head0.481
Teacher spread0.373 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations21
Published2017
Admission routes1
Has abstractyes

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