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Repeatability of real world, non-research chest CT scan-based lung density metrics

2017· article· en· W2780104995 on OpenAlexaff
Ronald J. Dandurand, Myriam Dandurand, Raúl San Jośe Estépar, Jean Bourbeau, David H. Eidelman

Bibliographic record

Venuenot available
Typearticle
Languageen
FieldMedicine
TopicChronic Obstructive Pulmonary Disease (COPD) Research
Canadian institutionsMcGill University Health Centre
Fundersnot available
KeywordsMedicineReproducibilityNuclear medicineRepeatabilityIntraclass correlationLung volumesPercentileSpirometryRadiologyLungAsthmaInternal medicineMathematicsStatistics

Abstract

fetched live from OpenAlex

Quantitative CT (QCT) is carried out with attention to quality control (scanner make and model, calibration, lung volume and acquisition protocol), and bears financial and radiation cost. We wished to determine if non-research CT scans without such controls could yield reproducible data. 62 subjects (53 COPD, 6 asthma, 2 micronodules, 1 sarcoidosis) from a community respirology practice had had 2 non-contrast CT scans judged free of significant infiltrates, performed on 5 models of scanner in 9 different community hospitals for clinical indications within 14 months and had available spirometry and lung volumes performed respecting ATS criteria within 13 months of CT scans. Images were analyzed with AirwayInspector (airwayinspector.acil-bwh.org) for LAA<-950HU, lung density (LD) at 15th percentile + 1000HU and total lung volume (TLV). Means, Bland-Altman analysis and intraclass correlation coefficients were determined for TLV, LAA, LD and LD corrected for both predicted and measured TLC. Differences were determined with Student t-tests. Significance was set at p<05. Results are shown in Table 1. Real-world CT scans, if properly selected, can yield reproducible QCT data. Correcting LD with PFT measured TLC improves reproducibility more than correcting with predicted TLC. If validated at other centres, these findings suggest the pool of observational QCT data could be vastly expanded at little dollar and no radiation cost.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.012
metaresearch head score (Gemma)0.032
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesMetaresearch
Consensus categoriesnone
DomainCandidate signal: Reproducibility · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.988
Threshold uncertainty score0.064

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0120.032
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.001
Science and technology studies0.0000.001
Scholarly communication0.0010.001
Open science0.0010.001
Research integrity0.0010.000
Insufficient payload (model declined to judge)0.0010.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.071
GPT teacher head0.404
Teacher spread0.333 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

Study designObservational
DomainReproducibility
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

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Citations0
Published2017
Admission routes1
Has abstractyes

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