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Record W2781725568 · doi:10.31237/osf.io/8y6s7

Voxel-Wise Image Analysis for White Matter Hyperintensity Segmentation

2018· preprint· en· W2781725568 on OpenAlexaff
Jesse Knight

Bibliographic record

Venuenot available
Typepreprint
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicRNA regulation and disease
Canadian institutionsUniversity of Guelph
Fundersnot available
KeywordsSegmentationInterpretabilityArtificial intelligenceComputer scienceVoxelPattern recognition (psychology)HyperintensityImage segmentationOverfittingFluid-attenuated inversion recoveryLogistic regressionPixelScale-space segmentationComputer visionMachine learningMagnetic resonance imagingMedicineArtificial neural network

Abstract

fetched live from OpenAlex

White matter hyperintensities (WMH) are regions of increased pixel intensity in T2-weighted MRI which are correlated with several neurodegenerative diseases. Human segmentation of WMH is time consuming and inconsistent, motivating automation of WMH segmentation. While many algorithms for this task have previously been proposed, few have been validated on MRI from different sources, despite the sensitivity of most algorithms to source-specific image features. This thesis presents a segmentation algorithm called “Voxel-Wise Logistic Regression” (VLR), which provides both good interpretability and segmentation performance. VLR uses FLAIR MRI to estimate the WMH class probability image using spatially varying logistic parameters β(x). These “parameter images” also concisely summarize the model class discrimination. Additionally, a validation framework called “Leave-One-Source-Out Cross Validation” (LOSO-CV) is introduced, which provides more realistic estimation of model performance on “never-before-seen” MRI sources. Segmentation performance of the VLR model under LOSO-CV is presented using 96 open-source images from 7 MRI sources.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.004
metaresearch head score (Gemma)0.017
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Simulation or modeling · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: none
Teacher disagreement score0.004
Threshold uncertainty score0.022

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0040.017
Meta-epidemiology (narrow)0.0010.001
Meta-epidemiology (broad)0.0010.002
Bibliometrics0.0030.002
Science and technology studies0.0010.001
Scholarly communication0.0020.001
Open science0.0020.002
Research integrity0.0010.002
Insufficient payload (model declined to judge)0.0030.003

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.013
GPT teacher head0.277
Teacher spread0.264 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designSimulation or modeling
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2018
Admission routes1
Has abstractyes

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