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Record W2784690060

The role of Nkx6.1 in maintenance of pancreatic beta cell identity and function

2013· article· en· W2784690060 on OpenAlexfundno aff
Brandon L. Taylor

Bibliographic record

VenueeScholarship (California Digital Library) · 2013
Typearticle
Languageen
FieldMedicine
TopicPancreatic function and diabetes
Canadian institutionsnot available
FundersNational Institutes of HealthUniversity of California, San DiegoUniversity of TorontoHarvard UniversityInstitut National de la Santé et de la Recherche MédicaleOregon State UniversityUniversity of PennsylvaniaVanderbilt University
KeywordsBeta cellBiologyPAX4PancreasEnteroendocrine cellEndocrine systemProgenitor cellCell biologyBETA (programming language)Transcription factorEndocrinologyInternal medicineStem cellHomeoboxInsulinGeneGeneticsIsletHormoneMedicineComputer science
DOInot available

Abstract

fetched live from OpenAlex

The insulin producing beta cells of the pancreas are essential for maintaining blood glucose levels. With either the destruction or dysfunction of beta cells leading to the onset of diabetes mellitus, it is necessary to understand the factors that maintain beta cells and their function. Nkx6.1 is a homeodomain transcription factor that is required for beta cell development. It is expressed in pancreatic progenitors and once pancreatic development is complete, Nkx6.1 expression becomes restricted to insulin producing beta cells. Although the functional importance of Nkx6.1 during the earliest steps of pancreatic development is known, it is less clear how Nkx6.1 regulates beta cell development and whether Nkx6.1 is required to maintain adult beta cells. Therefore, we developed mice with a conditional Nkx6.1 loss of function allele to examine the spatial and temporal requirements for Nkx6.1.By conditionally ablating Nkx6.1 in pancreatic endocrine progenitors of mice, we found that Nkx6.1 promotes beta cell development at the expense of non-beta endocrine cell subtypes. Nkx6.1 achieves this through direct repression of genetic lineage determinants of non-beta endocrine cells. Once specified, Nkx6.1 continues to be required in beta cells to repress delta cell gene programs. Therefore, Nkx6.1 promotes and maintains beta cell identity through repression of alternative endocrine lineages.In addition to regulating beta cell identity, we determined that Nkx6.1 is also a master regulator of mature beta cell function. By directly regulating genes required for central beta cell functions, Nkx6.1 maintains insulin biosynthesis and glucose import and metabolism. Consequently, deletion of Nkx6.1 in beta cells of adult mice causes the rapid onset of diabetes. By maintaining glucose import, Nkx6.1 also indirectly influences glucose stimulated beta cell proliferation. This role for Nkx6.1 is essential, as loss of Nkx6.1 in neonatal beta cells results in decreased beta cell mass expansion. Finally, we show that Nkx6.1 maintains identity of adult beta cells, as Nkx6.1-deficient beta cells adopt delta cell characteristics over time.Overall, our studies uncover the functional importance of a beta cell specific transcription factor, Nkx6.1, as a central regulator of pancreatic beta cell identity and cellular function.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.001
Threshold uncertainty score0.003

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0010.001
Open science0.0000.000
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.008
GPT teacher head0.197
Teacher spread0.189 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2013
Admission routes1
Has abstractyes

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