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Record W2786281345 · doi:10.11646/phytotaxa.338.1.7

A new species of Digenea (Rhodomelaceae, Ceramiales) based upon a molecular assessment and morphological observations of plants historically known as D. simplex in Bermuda

2018· article· en· W2786281345 on OpenAlexafffund
Craig W. Schneider, Bilal F. Hamzeh, Christopher E. Lane, Gary W. Saunders

Bibliographic record

VenuePhytotaxa · 2018
Typearticle
Languageen
FieldEarth and Planetary Sciences
TopicMarine and coastal plant biology
Canadian institutionsUniversity of New Brunswick
FundersDivision of Environmental BiologyNew Brunswick Innovation FoundationDivision of Ocean SciencesNatural Sciences and Engineering Research Council of CanadaDana FoundationOffice of Experimental Program to Stimulate Competitive ResearchNational Science Foundation
KeywordsBiologyType localityDigeneaPantropicalCeramialesTaxonomy (biology)Species complexRhodomelaceaeMediterranean seaZoologyEcologyMediterranean climateAlgaePhylogenetic treeGeneGenusTrematodaGenetics

Abstract

fetched live from OpenAlex

Using mitochondrial COI-5P as a barcode marker, the red algal species previously identified as Digenea simplex in Bermuda is shown to be distinct from this species found in the Adriatic (type locality) and Mediterranean Seas, as well as other tropical locations worldwide. This finding led to a comparative study of the morphology of Bermuda specimens and D. simplex from the type locality, as well as other congeners. Our data show the Bermuda specimens to be morphologically, as well as genetically, distinct from D. simplex necessitating the description of D. arenahauriens sp. nov. for plants found in the islands and a single collection from the Caribbean Sea. It represents the first species partitioned from the “pantropical” D. simplex and we present genetic evidence of additional undescribed isolates in the species complex requiring further study.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.006
Threshold uncertainty score0.011

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.000
Science and technology studies0.0010.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.037
GPT teacher head0.258
Teacher spread0.221 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations12
Published2018
Admission routes2
Has abstractyes

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