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Record W2789541982 · doi:10.1093/jcag/gwy008.009

A8 PROLONGED FASTING ALTERS THE GUT MICROBIOME AND PROTECTS AGAINST SALMONELLA-INDUCED GUT INFLAMMATION

2018· article· en· W2789541982 on OpenAlexaff
Franziska A. Graef, Jennifer Lau, Else S. Bosman, Mimi Kuan, Hong Yang, Larissa Sbaglia Celiberto, Julia C. Berkmann, Martin Ståhl, Shauna M. Crowley, Hongbing Yu, Michael G. Surette, Elena F. Verdú, Kevan Jacobson, Bruce A. Vallance

Bibliographic record

VenueJournal of the Canadian Association of Gastroenterology · 2018
Typearticle
Languageen
FieldAgricultural and Biological Sciences
TopicHorticultural and Viticultural Research
Canadian institutionsMcMaster UniversityBC Children's Hospital
Fundersnot available
KeywordsColitisInflammationSalmonella infectionMicrobiomeAnorexiaImmunologySalmonellaBiologyGut floraGastrointestinal tractPathogenSystemic inflammationMedicineMicrobiologyInternal medicineBacteriaBioinformatics

Abstract

fetched live from OpenAlex

During periods of acute sickness, all animals including humans voluntarily decrease their food intake, a behavior known as “infection-induced anorexia”. Since infection-induced anorexia or fasting is highly conserved amongst mammals, we and others have proposed that it actually promotes host-defense. Several studies have demonstrated that fasting indeed attenuates disease during acute systemic infection or chronic inflammation. Since the Gastrointestinal tract is the first organ to be affected by food deprivation, we investigated if fasting alters the course of infection and/or ameliorates intestinal inflammation using a mouse model of S. typhimurium-induced colitis. We furthermore examined if fasting modifies the resident gut microbiota, and whether these modifications are instrumental to alter the course of S. typhimurium infection and colitis. S. typhimurium causes severe colitis in streptomycin pre-treated, orally infected mice as early as 12h post infection. C57BL/6 conventional as well as germfree mice were fed or fasted for 24h and orally infected with S. typhimurium, continuing the fast for another 6h to 24h. Additionally, C57BL/6 conventional mice were fed single macronutrients to gauge the effect of different nutrients on the infection. Pathology as well as Salmonella colonization, was assessed by histological and immunofluorescent staining and organ pathogen burden counts; inflammatory gene transcription was measured by qPCR. Microbiome profiling of intestinal contents was performed utilizing 16S rRNA sequencing. Fasting completely abrogated S. typhimurium infection and colitis in conventional C57BL/6 mice, whereas infection still proceeded, albeit in a reduced fashion in germfree mice in concert with minimal signs of inflammation. Microbiome profiles between fed and fasted groups differed greatly in terms of beta diversity with the fasting group showing a consistent increase in the genus Akkermansia. Feeding mice glucose alone was not sufficient to re-establish the infection, but preliminary results indicate that other macronutrients can partially restore Salmonella colonization. Taken together, our findings show that prolonged fasting dramatically protects the host against S. typhimurium infection, in part by altering the intestinal microbiome and increasing colonization resistance, likely by limiting nutrient availability for the pathogenic bacteria. Additionally our results indicate that food deprivation impairs Salmonella virulence and reduces its ability to promote an inflammatory environment independent of changes in the microbiome. CCC, CIHRNSERC

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.003
Threshold uncertainty score0.012

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0030.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.017
GPT teacher head0.228
Teacher spread0.210 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

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Citations0
Published2018
Admission routes1
Has abstractyes

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