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Record W2792030263 · doi:10.1093/jcag/gwy008.226

A225 THE UTILITY OF SEPARATE DISTAL AND MID-ESOPHAGEAL BIOPSIES IN THE DIAGNOSIS OF EOSINOPHILIC ESOPHAGITIS (EOE).

2018· article· en· W2792030263 on OpenAlexaff
M Alkhattabi, Matthew Kubica, David K. Driman, James C. Gregor

Bibliographic record

VenueJournal of the Canadian Association of Gastroenterology · 2018
Typearticle
Languageen
FieldMedicine
TopicEosinophilic Esophagitis
Canadian institutionsWestern University
Fundersnot available
KeywordsEosinophilic esophagitisMedicineDysphagiaGERDEsophagusEosinophiliaGastroenterologyInternal medicineHigh-power fieldGold standard (test)EosinophilRefluxDiseaseRadiologyAsthma

Abstract

fetched live from OpenAlex

EoE is an increasingly recognized cause of upper gastrointestinal symptomatology particularly dysphagia. The gold standard for diagnosis is the presence of increased eosinophils on esophageal biopsies. To distinguish EoE from esophageal eosinophilia due to gastroesophageal reflux disease (GERD), many physicians routinely separate biopsies from the mid and distal esophagus, theorizing that eosinophils will be more numerous in the distal esophagus in GERD and more diffusely distributed in EoE. The aim of our study was to determine if this approach was truly helpful in clinical practice. To determine the utility of comparing distal and mid-esophageal counts in differentiating EoE from GERD. All endoscopically obtained biopsies of the esophagus taken at London Health Sciences Centre between July 1, 2011 and June 30, 2014 were eligible for review. Patients were only included if they were 18 year old or older and biopsies were taken from the mid and distal esophagus for non-neoplastic findings and separated for review. The pathology was then reviewed by a pathologist blinded to diagnosis and a mean eosinophil count per high-power field (hpf) was calculated for each area. A delta eosinophil count (DEC) was calculated by subtracting the mean count in the distal esophagus from the mean count in the mid-esophagus. If multiple endoscopies were performed, only the first biopsy after the study initiation date was used. 603 patients were included in the analysis. Of these 138 (22.9 %) had a final diagnosis of GERD, 124 (20.6 %) EoE and 341 (56.5 %) normal. The most common predominant symptoms in GERD were heartburn 99 (71.7 %) and dysphagia to solids 70 (50.7 %). The most common predominant symptoms in EoE were dysphagia to solids 90 (72.6 %), atopic symptoms 41 (33.1 %), heartburn 40 (32.3 %) and food impaction 38 (30.6 %). The most common endoscopic findings in EoE were furrows 81 (65.3 %), trachealization 70 (56.4 %) and stricture 29 (32.4 %). The mean eosinophil count in the distal and mid-esophagus respectively was 6.6 and 2.8 in GERD, 80.4 and 76.9 in EoE and 0 and 0 in normal patients. The DEC was positive in 20.3 % of GERD patients and 41.1 % of EoE patients. The mean DEC was -3.8 in GERD patients and -3.5 in patients with EoE. Mucosal eosinophilia is significantly more pronounced in patients with EoE although the difference between eosinophil counts in the mid and distal appears to be of only marginal value in distinguishing between the two diagnoses. Separating specimens for analysis does not appear to be necessary. None

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.005
metaresearch head score (Gemma)0.013
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.006
Threshold uncertainty score0.027

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0050.013
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0010.001
Bibliometrics0.0020.002
Science and technology studies0.0000.000
Scholarly communication0.0010.001
Open science0.0000.001
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0060.002

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.012
GPT teacher head0.254
Teacher spread0.242 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

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Citations1
Published2018
Admission routes1
Has abstractyes

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