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Record W2792093419 · doi:10.1093/jcag/gwy008.171

A170 MACROPHAGE SUBSET PHENOTYPE IS ALTERED IN CHRONIC HCV INFECTION & MAY CONTRIBUTE TO GENERALIZED CD8+T-CELL DYSFUNCTION

2018· article· en· W2792093419 on OpenAlexafffundabout
Faria Ahmed, Ashok Kumar, Curtis Cooper, Angela M. Crawley

Bibliographic record

VenueJournal of the Canadian Association of Gastroenterology · 2018
Typearticle
Languageen
FieldImmunology and Microbiology
TopicImmune cells in cancer
Canadian institutionsOttawa HospitalChildren's Hospital of Eastern OntarioUniversity of Ottawa
FundersNatural Sciences and Engineering Research Council of CanadaOntario HIV Treatment Network
KeywordsCD8CD163ImmunologyPhenotypeCytotoxic T cellChronic infectionT cellCD86BiologyImmune systemMedicineIn vitroGeneGenetics

Abstract

fetched live from OpenAlex

It has been previously shown that chronic HCV infection causes generalized CD8+T-cell impairment, not limited to HCV-specific CD8+T-cell populations. In such an inflammatory hepatic disease, infiltrating monocyte-derived macrophages (MDM) contribute to a micro-environment that could influence cells trafficking through the liver, including CD8+T-cells. These MDM can differentiate into M1 (classically-activated) and M2a, M2b, M2c (alternatively-activated) with pro- and anti-inflammatory functions, respectively. Whether MDM subset generation in chronic HCV infection is altered in the liver is unknown. Furthermore, how these subsets influence CD8+ T-cell function needs investigation. We hypothesize that MDM subset phenotypes are altered in chronic HCV infection, thereby contributing to CD8+T-cell dysfunction. Aim 1: Assess the phenotypic differences between macrophage subsets in health and chronic HCV infection. Aim 2: Examine the role of polarized macrophage subsets in altering CD8+T-cell function. MDM subsets were generated from blood collected from healthy controls and HCV-infected individuals. Phenotypes were confirmed using surface receptors (CD163, CD206 and CD86) and quantification of secreted cytokines (IL-6, IL-10, IL-12, IFN-y and TNF-α). Autologous co-culture of MDM subsets and isolated CD8+T-cells in health enabled the assessment of CD8+T-cell functions. MDM subset phenotyping in chronic HCV infection suggests M2a cells have a higher percentage of CD206+ than M0 subset whereas in health, they showed no significant difference. In HCV infection, the concentration of IL-6 in M2a subset supernatants was significantly higher than healthy controls. In chronic infection, TNF-α release by any MDM subset was undetectable, whereas in health, M1 cells produced significantly higher amounts of TNF-α compared to M0 and M2a subsets. No differences were observed in the concentration of IL-10, IL-12p70, IFN-y, CD86 and CD163 between the subject groups. In uninfected controls, co-culturing CD8+ T-cells with M1 macrophages significantly increased the percentage of perforin+, CD107a+ and IFN-y+ CD8+ T-cells, compared to CD8+T-cells alone and M2a subset. Phenotypic alterations in health and chronic HCV infection are evident both in terms of surface receptors and secreted cytokines suggesting impairment of MDM subsets. The importance of an M1 phenotype, in being able to prime CD8+T-cells and induce perforin and CD107a is evident. How the altered phenotype of MDM subsets in chronic HCV infection will influence the CD8+T-cell function, needs to be further investigated. Role of MDM Subsets in CD8+T-cell function in health Canadian Network on Hepatitis C (Stipend Funding), NSERC (Lab Funding), OHTN, J.P.Bickell Foundation.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.001
Threshold uncertainty score0.004

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.009
GPT teacher head0.235
Teacher spread0.226 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

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Citations0
Published2018
Admission routes3
Has abstractyes

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Same venueJournal of the Canadian Association of GastroenterologySame topicImmune cells in cancerFrench-language works237,207