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Record W2792880182 · doi:10.1093/jcag/gwy009.164

A164 HIGHLY EFFICIENT DIFFERENTIATION OF HUMAN PLURIPOTENT STEM CELLS INTO LONG-TERM EXPANDABLE “MINI-GUT” ORGANOIDS

2018· article· en· W2792880182 on OpenAlexaff
Philipp Krämer, Philippe Soriano, Ryan Conder, Terry E. Thomas, Allen Eaves, Sharon A. Louis

Bibliographic record

VenueJournal of the Canadian Association of Gastroenterology · 2018
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicPluripotent Stem Cells Research
Canadian institutionsStemcell Technologies
Fundersnot available
KeywordsOrganoidEndodermInduced pluripotent stem cellCell biologyStem cellBiologyHindgutEmbryonic stem cellCellular differentiationKLF4Directed differentiationMesenchymeSOX2MatrigelCDX2Adult stem cellMesenchymal stem cellCell cultureHomeoboxBiochemistryGeneticsBotany

Abstract

fetched live from OpenAlex

The differentiation of human pluripotent stem cells (hPSC) into intestinal organoids represent an attractive mechanism for generating cells for disease modelling, drug screening and cell-replacement therapy. Although it is possible to generate intestinal organoids from adult stem cells, the derivation of organoids from hPSCs has been shown to result in a broader variety of cells as the starting material. Introduce novel PSC to intestinal differentiation kit and protocols. We developed the STEMdiff™ Intestinal Organoid Kit, a specialized serum-free and fully-defined medium formulation that efficiently and reproducibly promotes differentiation of human embryonic stem (ES) and induced pluripotent stem (iPS) cells through developmental stages of 1) definitive endoderm, 2) mid-/hindgut, and 3) small intestine. Here we demonstrate that monolayers generated with multiple human ES (WA01, WA07, WA09) and iPS (WLS-1C, STiPS-FO16, STiPS-MOO1) lines maintained in mTeSR™ with Corning Matrigel™, differentiate into FOXA2+/SOX17+ endoderm cultures with an efficiency of 81.6% ± 8.6% (n=21). Further differentiation into posterior endoderm to promote the formation of mid-/hindgut resulted in 71.4 ± 8.5% (n=13) of cells expressing the hindgut marker CDX2, but none of the cells expressing the anterior gut tube marker SOX2. Twenty-four hours after the emergence of CDX2+ cells, clusters in the flat cell sheet monolayers changed their morphology to tightly packed epithelial tubes that generated budding spheroids which detached from the monolayer. These detached hindgut spheroids are composed of CDX2+/E-cadherin+ epithelia and adjacent CDX2+/VIM+ mesenchyme. When these spheroids were collected, embedded in Corning™ Matrigel™ and cultured in fully defined IntestiCult™-hPSC Organoid Growth Medium (OGM), they generated intestinal organoids composed of a polarized intestinal epithelium patterned into villus-like structures, and a surrounding niche factor-producing mesenchyme. Organoids cultured for > 25 days in vitro and analyzed by immunohistochemistry and/or qRT-PCR demonstrate the presence of enterocytes (villin), goblet cells (MUC2), paneth cells (lysozyme), and intestinal stem cells (LGR5). These organoids can be further dissociated and passaged every 7 to 10 days for multiple passages in IntestiCult™-hPSC OGM. Our results demonstrated that a starting population of approximately 200,000 hPSCs seeded in a single well of a 24-well plate gave rise to 216 ± 19.7% (n=10) intestinal organoids, which could be passaged and expanded long-term (> 8 months, n=3) using IntestiCult™-hPSC OGM. In summary, STEMdiff™ Intestinal Organoid Kit is an easy to use kit for the derivation of large quantities of human intestinal organoids from hPSC in a highly efficient and reproducible manner. None

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.002
Threshold uncertainty score0.007

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0020.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.008
GPT teacher head0.236
Teacher spread0.228 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2018
Admission routes1
Has abstractyes

Explore more

Same venueJournal of the Canadian Association of Gastroenterology→Same topicPluripotent Stem Cells Research→French-language works237,207→