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Record W2793602904 · doi:10.1139/cjas-2017-0069

Identification of serum metabolites associated with the risk of metritis in transition dairy cows

2018· article· en· W2793602904 on OpenAlexaffvenue
Dagnachew Hailemariam, Guanshi Zhang, Rupasri Mandal, David S. Wishart, Burim N. Ametaj

Bibliographic record

VenueCanadian Journal of Animal Science · 2018
Typearticle
Languageen
FieldAgricultural and Biological Sciences
TopicReproductive Physiology in Livestock
Canadian institutionsUniversity of Alberta
Fundersnot available
KeywordsMetritisMetabolitePyroglutamic acidMetabolomeMedicineEndometritisChemistryInternal medicineChromatographyBiochemistryBiologyAmino acidPregnancyLactation

Abstract

fetched live from OpenAlex

In this study, we aimed to identify metabolite signatures that characterize metritis prior to, during, and after the disease incidence. Blood samples were collected from 100 Holstein cows at five time points before and after parturition. Six cows that developed metritis and 20 controls were selected for metabolomics analysis in a nested case-control study. Twenty nine serum metabolites were quantified using gas chromatography–mass spectroscopy. Results showed that similar panels of metabolites differentiated pre-metritic and control cows at 8 and 4 wk prepartum. The top most important metabolites that differentiated the two groups of cows at 8 wk prepartum were oxalate, ornithine, pyroglutamic acid, d-mannose, and glutamic acid, and at 4 wk prepartum were ornithine, pyroglutamic acid, d-mannose, glutamic acid, and phosphoric acid, suggesting their potential use as risk biomarkers for metritis. Area under the curve with values of 1.0 and 0.969 at 8 and 4 wk, respectively, indicated that those panels of metabolites have a very high sensitivity and specificity to be used as risk biomarkers for metritis. Overall, results showed that specific serum metabolite signatures can be used to screen cows for susceptibility to metritis during the dry off period, and to better understand the etiopathobiology of the disease.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.001
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.002
Threshold uncertainty score0.003

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.001
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.001
Science and technology studies0.0000.000
Scholarly communication0.0010.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.017
GPT teacher head0.224
Teacher spread0.207 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations18
Published2018
Admission routes2
Has abstractyes

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Same venueCanadian Journal of Animal ScienceSame topicReproductive Physiology in LivestockFrench-language works237,207