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Record W2794342652 · doi:10.20381/ruor-13046

Diacylglycerol kinase zeta regulates Rac1-mediated remodeling of the actin cytoskeleton

2008· dissertation· en· W2794342652 on OpenAlexfundno aff
Hanan Abramovici

Bibliographic record

VenueuO Research (University of Ottawa) · 2008
Typedissertation
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicCellular Mechanics and Interactions
Canadian institutionsnot available
FundersCanadian Institutes of Health ResearchCancer Research SocietyFondation J. Armand BombardierALS Society of CanadaMuscular Dystrophy Association
KeywordsDiacylglycerol kinaseCell biologyCytoskeletonActinRAC1Actin cytoskeletonActin remodelingBiologyKinaseSignal transductionProtein kinase CGeneticsCell

Abstract

fetched live from OpenAlex

The lipid second messengers diacylglycerol (DAG) and phosphatidic acid (PA) regulate the activity and localization of actin reorganizing proteins that participate in cellular shape changes underlying important biological processes. DAG kinases (DGKs) phosphorylate DAG to yield PA, thereby attenuating the activity of DAG-activated proteins and stimulating proteins that respond to PA. Using cell biological and biochemical approaches, I explored the hypothesis that DGKzeta regulates actin cytoskeleton remodeling in mammalian cells by associating with and promoting the activity of the Rho GTPase Rac1 and the Rac1-activated kinase PAK1. I found that DGKzeta forms a complex with both proteins, and that PA from DGKzeta promotes the release of Rac1 from its inhibitor RhoGDI, triggering Rac1 activation. DGKzeta also regulates the localization and activity of PAK1. Furthermore, the ability of DGKzeta to promote Rac1 activity appears to underlie important physiological processes requiring the restructuring of the actin cytoskeleton such as cell migration, neurite outgrowth, and myoblast fusion. Localization of signaling complexes to specific cellular domains is required for complex changes in cell morphology. Because subcellular localization is critical for DGKzeta function, I investigated the molecular mechanisms underlying its targeting to different cellular compartments. I found that both PKC-mediated phosphorylation of the MARCKS domain and binding of the C-terminus to syntrophins regulate DGKzeta recruitment to the plasma membrane. Collectively, my results define a molecular mechanism that regulates the recruitment of DGKzeta to the membrane and that couples changes in DAG and PA to the activation of PAK1 and Rac1. These findings have uncovered a novel role for DGKzeta in actin cytoskeleton organization.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.001
Threshold uncertainty score0.004

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0010.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.025
GPT teacher head0.282
Teacher spread0.256 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2008
Admission routes1
Has abstractyes

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