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Record W2796430964 · doi:10.1111/pai.12903

Atopic dermatitis: Interaction between genetic variants of <i><scp>GSTP</scp>1</i>,<i><scp>TNF</scp></i>,<i><scp>TLR</scp>2</i>, and <i><scp>TLR</scp>4</i> and air pollution in early life

2018· article· en· W2796430964 on OpenAlexafffund
Anke Hüls, Claudia Klümper, Elaina MacIntyre, Michael Bräuer, Erik Melén, Mario Bauer, Dietrich Berdel, Anna Bergström, Bert Brunekreef, Moira Chan‐Yeung, Elaine Fuertes, Ulrike Gehring, Anna Gref, Joachim Heinrich, Marie Standl, Irina Lehmann, Marjan Kerkhof, Gerard H. Koppelman, Anita L. Kozyrskyj, Göran Pershagen, Christopher Carlsten, Ursula Krämer, Tamara Schikowski

Bibliographic record

VenuePediatric Allergy and Immunology · 2018
Typearticle
Languageen
FieldMedicine
TopicDermatology and Skin Diseases
Canadian institutionsUniversity of AlbertaUniversity of British ColumbiaPublic Health OntarioUniversity of Toronto
FundersStiftelsen Frimurare Barnhuset i StockholmVetenskapsrådetNaturvårdsverketCanadian Institutes of Health ResearchStockholms Läns LandstingHjärt-LungfondenNederlandse Organisatie voor Wetenschappelijk OnderzoekSvenska Sällskapet för Medicinsk ForskningSvenska Forskningsrådet FormasZonMw
KeywordsSingle-nucleotide polymorphismMedicineAtopic dermatitisImmunologySNPOxidative stressAlleleInflammationPopulationGeneticsGenotypeGeneInternal medicineBiologyEnvironmental health

Abstract

fetched live from OpenAlex

Abstract Background Associations between traffic‐related air pollution (TRAP) and childhood atopic dermatitis (AD) remain inconsistent, possibly due to unexplored gene‐environment interactions. The aim of this study was to examine whether a potential effect of TRAP on AD prevalence in children is modified by selected single nucleotide polymorphisms (SNPs) related to oxidative stress and inflammation. Methods Doctor‐diagnosed AD up to age 2 years and at 7‐8 years, as well as AD symptoms up to age 2 years, was assessed using parental‐reported questionnaires in six birth cohorts (N = 5685). Associations of nitrogen dioxide (NO2) estimated at the home address of each child at birth and nine SNPs within the GSTP1, TNF, TLR2, or TLR4 genes with AD were examined. Weighted genetic risk scores (GRS) were calculated from the above SNPs and used to estimate combined marginal genetic effects of oxidative stress and inflammation on AD and its interaction with TRAP. Results GRS was associated with childhood AD and modified the association between NO2 and doctor‐diagnosed AD up to the age of 2 years (P(interaction) = .029). This interaction was mainly driven by a higher susceptibility to air pollution in TNF rs1800629 minor allele (A) carriers. TRAP was not associated with the prevalence of AD in the general population. Conclusions The marginal genetic association of a weighted GRS from GSTP1, TNF, TLR2, and TLR4SNPs and its interaction with air pollution supports the role of oxidative stress and inflammation in AD.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.001
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.003
Threshold uncertainty score0.007

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.001
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.001
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0020.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.009
GPT teacher head0.230
Teacher spread0.222 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations41
Published2018
Admission routes2
Has abstractyes

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