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Record W2803086497

Asymptotic analysis of equations for the buffered diffusion of intracellular Ca2

2001· article· en· W2803086497 on OpenAlexfundno aff
Gregory D. Smith, Longxiang Dai, Robert M. Miura, Arthur Sherman

Bibliographic record

VenueW&M Publish (College of William & Mary) · 2001
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicReceptor Mechanisms and Signaling
Canadian institutionsnot available
FundersNational Eye InstituteNatural Sciences and Engineering Research Council of CanadaNational Institutes of Health
KeywordsDiffusionAsymptotic analysisIntracellularMathematicsMathematical analysisApplied mathematicsPhysicsChemistryThermodynamics
DOInot available

Abstract

fetched live from OpenAlex

The "domain" calcium (Ca2+) concentration near an open Ca2+ channel can be mod- eled as buffered diffusion from a point source. The concentration profiles can be well approximated by hemispherically symmetric steady-state solutions to a system of reaction-diffusion equations. After nondimensionalizing these equations and scaling space so that both reaction terms and the source amplitude are 0(1), we identify two dimensionless parameters, Cc and Eb, that correspond to the diffusion coefficients of dimensionless Ca2+ and buffer, respectively. Using perturbation methods, we derive approximations for the Ca2+ and buffer profiles in three asymptotic limits: (1) an "excess buffer approximation" (EBA), where the mobility of buffer exceeds that of Ca2+ (Eb > Ec) and the fast diffusion of buffer toward the Ca2+ channel prevents buffer saturation (cf. Neher [Calcium Electrogenesis and Neuronal Functioning, Exp. Brain Res. 14, Springer-Verlag, Berlin, 1986, pp. 80-96]); (2) a "rapid buffer approximation" (RBA), where the diffusive time-scale for Ca2+ and buffer are comparable, but slow compared to reaction (ec << 1, Eb reaction (ec << 1, Eb reaction (ec << 1, Eb

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.002
metaresearch head score (Gemma)0.011
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Simulation or modeling · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: none
Teacher disagreement score0.006
Threshold uncertainty score0.014

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0020.011
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0010.001
Bibliometrics0.0010.000
Science and technology studies0.0000.002
Scholarly communication0.0010.002
Open science0.0010.002
Research integrity0.0010.002
Insufficient payload (model declined to judge)0.0030.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.013
GPT teacher head0.236
Teacher spread0.222 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designSimulation or modeling
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations9
Published2001
Admission routes1
Has abstractyes

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