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Record W2807186115 · doi:10.1017/9781108526227

Dynamics of Engineered Artificial Membranes and Biosensors

2018· book· en· W2807186115 on OpenAlexaff
William Hoiles, Vikram Krishnamurthy, Bruce Cornell

Bibliographic record

VenueCambridge University Press eBooks · 2018
Typebook
Languageen
FieldNeuroscience
TopicPhotoreceptor and optogenetics research
Canadian institutionsUniversity of British Columbia
Fundersnot available
KeywordsMembraneBiosensorMesoscopic physicsNanotechnologyLipid bilayerMolecular dynamicsSynthetic biologyBiophysicsComputer scienceMaterials scienceChemistryPhysicsComputational biologyBiologyBiochemistryComputational chemistry

Abstract

fetched live from OpenAlex

In simple terms a biological membrane consists of two layers of fat that slide on each other – hence membranes are called lipid bilayers. Biological membranes include more than just the cell membrane. Within the cell, there are several structures that are bound by membranes; these structures are called organelles and include the nucleus, mitochondria, endoplasmic reticulum, Gogli apparatus, and lysomes. Why Membranes? Why biological membranes? Membranes and the macromolecules embedded in them perform extremely important biological functions. They form selectively permeable barriers that enclose cells and organelles within the cell. The cell membrane is the target of physical, chemical, and biological agents such as thermal and mechanical stress, toxins, hormones, viruses, and microbes. Biological membranes exhibit remarkable properties. Embedded in the membrane are protein macromolecules that perform crucial functions for a living cell. For example, ion channels are subnanosized pores formed out of proteins in the membrane that selectively open and close and allow ions to flow into the cell. It is known that almost 25 percent of genes code for membrane proteins. Also, more than 50 percent of available drugs target membrane proteins [369]. Cytoskeletal filaments and sterols, such as cholesterol, give structural stability to the membrane. Antimicrobial drugs bind to specific sites in the membrane of bacterial cells and induce pores in the membrane that compromise the integrity of the membrane and lead to bacterial cell death. Applying a voltage across a membrane causes the membrane to spontaneously form pores – this process is called electroporation and is crucial for drug delivery mechanisms. A membrane has several moving parts that comprise lipids and macromolecules that perform a variety of biological tasks. For example, the assembly of new cellular membranes commonly results from old membranes in which membrane-bound enzymes construct new lipid molecules. These new lipid molecules then either diffuse into the old membrane or form vesicles which can merge with other membranes via vesicle fusion. Vesicle fusion requires the coordination of several proteins and macromolecules as biological membranes do not spontaneously fuse. The process of vesicle fusion and cellular membrane assembly is still an active area of research.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.001
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: none
GenreCandidate signal: Other · Consensus signal: none
Teacher disagreement score0.003
Threshold uncertainty score0.011

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.001
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.001
Scholarly communication0.0010.002
Open science0.0010.001
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0030.002

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.035
GPT teacher head0.237
Teacher spread0.202 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designNot applicable
Domainnot available
GenreOther

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations6
Published2018
Admission routes1
Has abstractyes

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