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Record W2808956335 · doi:10.1093/ajcn/nqy089

Best practices for the design, laboratory analysis, and reporting of trials involving fatty acids

2018· article· en· W2808956335 on OpenAlexafffund
J. Thomas Brenna, Mélanie Plourde, Ken D. Stark, Peter J.H. Jones, Yu‐Hong Lin

Bibliographic record

VenueAmerican Journal of Clinical Nutrition · 2018
Typearticle
Languageen
FieldNursing
TopicFatty Acid Research and Health
Canadian institutionsUniversity of ManitobaUniversity of WaterlooUniversité de Sherbrooke
FundersCanadian Institutes of Health ResearchCanada Research Chairs
KeywordsFatty acidChecklistPolyunsaturated fatty acidClinical study designMedicineComputer scienceBiotechnologyBiologyClinical trialBiochemistryBioinformatics

Abstract

fetched live from OpenAlex

Fatty acids are among the most studied nutrients in human metabolism and health. Endogenous fatty acid status influences health and disease via multiple mechanisms at all stages of the life cycle. Despite widespread interest, attempts to summarize the results of multiple studies addressing similar fatty acid-related outcomes via meta-analyses and systematic reviews have been disappointing, largely because of heterogeneity in study design, sampling, and laboratory and data analyses. Our purpose is to recommend best practices for fatty acid clinical nutrition and medical studies. Key issues in study design include judicious choice of sampled endogenous pools for fatty acid analysis, considering relevant physiologic state, duration of intervention and/or observation, consideration of specific fatty acid dynamics to link intake and endogenous concentrations, and interpretation of results with respect to known fatty acid ranges. Key laboratory considerations include proper sample storage, use of sample preparation methods known to be fit-for-purpose via published validation studies, detailed reporting or methods to establish proper fatty acid identification, and quantitative analysis, including calibration of differential response, quality control procedures, and reporting of data on a minimal set of fatty acids to enable comprehensive interpretation. We present a checklist of recommendations for fatty acid best practices to facilitate design, review, and evaluation of studies with the intention of improving study reproducibility.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.724
metaresearch head score (Gemma)0.852
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesMetaresearch
Consensus categoriesMetaresearch
DomainCandidate signal: Methods · Consensus signal: Methods
Study designCandidate signal: Not applicable · Consensus signal: none
GenreCandidate signal: Methods · Consensus signal: Methods
Teacher disagreement score0.276
Threshold uncertainty score0.340

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.7240.852
Meta-epidemiology (narrow)0.0070.010
Meta-epidemiology (broad)0.0120.013
Bibliometrics0.0270.020
Science and technology studies0.0070.016
Scholarly communication0.0260.012
Open science0.0170.010
Research integrity0.0250.037
Insufficient payload (model declined to judge)0.0080.011

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.376
GPT teacher head0.555
Teacher spread0.179 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; the direct Gemma label and the distilled Codex classifier agree on what is shown here.

Study designNot applicable
DomainMethods
GenreMethods

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations178
Published2018
Admission routes2
Has abstractno

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