MétaCan
Menu
Back to cohort
Record W2809952540 · doi:10.3389/fpls.2018.01008

Genetic Analysis of Floral Symmetry Transition in African Violet Suggests the Involvement of Trans-acting Factor for CYCLOIDEA Expression Shifts

2018· article· en· W2809952540 on OpenAlexfundno aff
Hui-Ju Hsu, Chengwen He, Wen‐Hsi Kuo, Kuan‐Ting Hsin, Jing‐Yi Lu, Zhao‐Jun Pan, Chun‐Neng Wang

Bibliographic record

VenueFrontiers in Plant Science · 2018
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicPlant Reproductive Biology
Canadian institutionsnot available
FundersNational Taiwan UniversityUniversity of British ColumbiaMinistry of Science and Technology, TaiwanNational Science Council
KeywordsPetalBiologyPhenotypeAlleleLocus (genetics)Directional selectionGeneTransition (genetics)Dominance (genetics)GynoeciumSymmetry in biologyEvolutionary biologyGeneticsBotanyGenetic variationStamen

Abstract

fetched live from OpenAlex

With growing demand for ornamental use, African violet (Saintpaulia ionantha) has been popular for variations in colors, shapes and their rapid responses to artificial selection. Wild type African violet (WT) is characterized by flowers with bilateral symmetry yet reversals to showy radially symmetrical flowers such as dorsalized (DA) and ventralized actinomorphic (VA) peloria are common. Genetic crosses among WT, DA and VA revealed that these floral symmetry transitions are likely to be controlled by three alleles at single locus in which the levels of dominance are in a hierarchical fashion. To investigate whether floral symmetry gene was responsible for these reversals, orthologues of CYCLOIDEA (CYC) were isolated and correlated their expressions to floral symmetry transitions. Quantitative RT-PCR and in-situ results indicated dorsal specific CYCs expression in WT S. ionantha (SiCYC1A and SiCYC1B) were shifted in DA with extended expression heterotopically to all petals, but in VA, SiCYC1s’ dorsally specific expressions were greatly reduced. Selection signature analysis revealed that the major high-expressed copy of SiCYC1A had been constrained under purifying selection, while the low expressed helper SiCYC1B, appeared to be relaxed from purifying selection after the duplication into SiCYC1A and SiCYC1B. Heterologous expression of SiCYC1A in Arabidopsis showed petal growth retardation which was attributed to limited cell proliferation. While expression shifts of SiCYC1A and SiCYC1B correlate perfectly to the resulting symmetry phenotype transitions in F1s of WT and DA, there is no certain allelic combination of inherited SiCYC1s associated with specific symmetry phenotypes. This indicates that although the expression shifts of SiCYC1A/1B are responsible for the two contrasting actinomorphic reversals in African violet, they are likely controlled by upstream trans-acting factors or epigenetic regulations.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.218
Threshold uncertainty score0.305

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0010.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.001
Science and technology studies0.0000.001
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.013
GPT teacher head0.251
Teacher spread0.238 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations12
Published2018
Admission routes1
Has abstractyes

Explore more

Same venueFrontiers in Plant ScienceSame topicPlant Reproductive BiologyFrench-language works237,207