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Record W2883787065

Genomics and Biomarker Research in Drug Development: Overrated, or a Revolution to Come?

2017· article· en· W2883787065 on OpenAlexvenueno aff
Marc Jutras

Bibliographic record

VenueUBC Faculty of Medicine medical journal · 2017
Typearticle
Languageen
FieldPharmacology, Toxicology and Pharmaceutics
TopicPharmacogenetics and Drug Metabolism
Canadian institutionsnot available
Fundersnot available
KeywordsPharmacogenomicsPersonalized medicineDrug developmentEngineering ethicsField (mathematics)BiomarkerPrecision medicineGenomicsData scienceMedicineComputer scienceDrugBioinformaticsBiologyEngineeringPharmacologyPathologyGenome
DOInot available

Abstract

fetched live from OpenAlex

At the basic science level, genomics and biomarker research have contributed great strides to our collective scientific knowledge and understanding of biological processes. Some of these research techniques have been applied to the field of drug development, permitting the new branch of pharmacogenomics to take shape. Although such research has promised to usher in an era of personalized medicine by providing unique treatments targeted to specific patient subgroups, progress in the field has been relatively slow thus far. To live up to its potential, researchers in the field must properly understand the inherent limitations of biomarkers, governmental regulations must adapt to changing technologies, and research must target clinically meaningful patient outcomes to make positive contributions to patient care.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.115
metaresearch head score (Gemma)0.090
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: none
GenreCandidate signal: Commentary · Consensus signal: Commentary
Teacher disagreement score0.115
Threshold uncertainty score0.608

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.1150.090
Meta-epidemiology (narrow)0.0020.001
Meta-epidemiology (broad)0.0050.002
Bibliometrics0.0030.004
Science and technology studies0.0050.040
Scholarly communication0.0150.055
Open science0.0050.011
Research integrity0.0210.029
Insufficient payload (model declined to judge)0.0110.004

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.361
GPT teacher head0.551
Teacher spread0.190 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designNot applicable
Domainnot available
GenreCommentary

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2017
Admission routes1
Has abstractyes

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