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Record W2884635707 · doi:10.1055/s-0038-1644916

Prairie to Pharmacy Research Program: Investigation of Prairie Plants for Chemicals that Inhibit Vital Cellular Pathways

2018· article· en· W2884635707 on OpenAlexaff
Alexis Bosco, Jan M. Tuescher, Layla Molina, Deserae Tailfeathers, Chad R. Beck, Sophie Kernéis, R. J. Andersen, RM Golsteyn

Bibliographic record

VenuePlanta Medica International Open · 2018
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicPlant tissue culture and regeneration
Canadian institutionsUniversity of British ColumbiaLethbridge CollegeUniversity of Lethbridge
Fundersnot available
KeywordsBiologyMitosisBotanyMetaphaseCell biologyBiochemistryGeneChromosome

Abstract

fetched live from OpenAlex

The prairie ecological zone harbours plants that flourish under the selective pressures of a short growing season and large grazing herbivores. These features induce plants to produce secondary metabolites that are toxic to mammals. Evidence from agricultural sources supports the hypothesis that these plants contain chemicals that will be toxic to human cells. We have prepared a unique extract library from prairie plants representing 18 taxonomical families. The majority of extracts in the library are toxic to cancer cells at concentrations ranging from 15 to 150µg/mL. A key component of our research is to use cell-based phenotypic assays to investigate precisely how the extracts or chemicals affect cells. We have identified an anti-mitotic activity in extracts from 5 species of the taxonomical family Asteraceae. Extracts PP-006 and PP-360 induced mitotic cell rounding characterized by high Cdk1 enzyme activity, a metaphase arrangement of chromosomes, followed by a striking distortion of the mitotic spindle and damaged chromosomes. By biology-guided fractionation of extracts, we isolated the natural product Pulchelloid A and four other sesquiterpenes that have anti-mitotic activity. Of the 3000 described sesquiterpenes, only 6 have a mitotic arrest activity. With extract PP-630 from the family Caprifoliaceae, we have observed an unusual cellular phenomenon in which treated cells acquire a large perinuclear vacuole. To date, the perinuclear region of cells is poorly described in structure and components. Finally, we have identified a pro-apoptotic activity from a flavone isolated from the Buffalo bean (Fabaceae). Our analysis indicates that prairie plants are a rich source of chemicals for use as tools to investigate cell function, and potential cancer treatments.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.143
Threshold uncertainty score0.402

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0010.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0010.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.124
GPT teacher head0.400
Teacher spread0.276 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2018
Admission routes1
Has abstractyes

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