Genome Wide Identification and Analysis of <i>TRK</i> Gene Family in <i>Aspergillus niger</i
Why this work is in the frame
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Bibliographic record
Abstract
TRK gene is related to potassium uptake and transport, which plays an important role in regulating the life activity of living organisms. Based on Aspergillus niger genome database, using bioinformatic method predicted the members of TRK gene family, gene structure and phylogenetic relationships of Aspergillus nig er. The phylogenetic tree was constructed using MEGA 6.0.6 software with Maximum Likelihood Tree method. Using PAL2NAL software estimated da/ds. The structure of the genes was analyzed by GSDS 2.0 software. The motif was analyzed by MEME program. Four members of TRK gene family in the genome of Aspergillus niger were identified, which were AnTrk1 , AnTrk2 , AnTrk3 and AnTrk4 , respectively. Both the TRK feature domain and the conserved motif were found. The structure of different genes was different, but the structure of cluster was similar. TRK gene family members of Aspergillus niger in the genetic structure and other aspects of existed significant differences with the yeast. Genetic relationships and protein interaction network analysis have further verified this conclusion. Therefore, it can infer that TRK gene of Aspergillus niger has other regulation pathways. This conclusion could provide the basis for further research on the function and mechanism of TRK osmotic stress related protein, so as to lay a foundation for understanding the mechanism of the osmotic adjustment of Aspergillus niger .
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Full frame distilled prediction
Teacher imitationNot calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.
Codex and Gemma teacher scores by category
| Category | Codex | Gemma |
|---|---|---|
| Metaresearch | 0.000 | 0.000 |
| Meta-epidemiology (narrow) | 0.000 | 0.000 |
| Meta-epidemiology (broad) | 0.001 | 0.000 |
| Bibliometrics | 0.000 | 0.001 |
| Science and technology studies | 0.000 | 0.000 |
| Scholarly communication | 0.000 | 0.000 |
| Open science | 0.000 | 0.000 |
| Research integrity | 0.000 | 0.000 |
| Insufficient payload (model declined to judge) | 0.000 | 0.000 |
Machine scores (provisional)
The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.
Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.
score_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it