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Record W2886579953 · doi:10.1111/mpp.12742

Redox signalling from NADPH oxidase targets metabolic enzymes and developmental proteins in <i>Fusarium graminearum</i>

2018· article· en· W2886579953 on OpenAlex
Ursla Fernando, Salima Chatur, Manisha Joshi, Christopher Bonner, Tao Fan, Keith Hubbard, Denise Chabot, Owen Rowland, Li Wang, Rajagopal Subramaniam, Christof Rampitsch

Why this work is in the frame

A frame that forgets how it found something cannot be audited. These are the routes that admitted this work.

affAt least one author lists a Canadian institution in the pinned OpenAlex snapshot.

Bibliographic record

VenueMolecular Plant Pathology · 2018
Typearticle
Languageen
FieldImmunology and Microbiology
TopicNeutrophil, Myeloperoxidase and Oxidative Mechanisms
Canadian institutionsCarleton UniversityAgriculture and Agri-Food Canada
Fundersnot available
KeywordsBiologyNADPH oxidaseBiochemistryCysteineEnzymeReactive oxygen speciesSerine

Abstract

fetched live from OpenAlex

Summary NADPH oxidase (NOX) is one of the sources of reactive oxygen species (ROS) that modulates the activity of proteins through modifications of their cysteine residues. In a previous study, we demonstrated the importance of NOX in both the development and pathogenicity of the phytopathogen Fusarium graminearum . In this article, comparative proteomics between the wild‐type and a Nox mutant of F. graminearum was used to identify active cysteine residues on candidate redox‐sensing proteins. A two‐dimensional gel approach based on labelling with monobromobimane (mBBR) identified 19 candidate proteins, and was complemented with a gel‐free shotgun approach based on a biotin switch method, which yielded 99 candidates. The results indicated that, in addition to temporal regulation, a large number of primary metabolic enzymes are potentially targeted by NoxAB ‐generated ROS. Targeted disruption of these metabolic genes showed that, although some are dispensable, others are essential. In addition to metabolic enzymes, developmental proteins, such as the Woronin body major protein (FGSG_08737) and a glycosylphosphatidylinositol (GPI)‐anchored protein (FGSG_10089), were also identified. Deletion of either of these genes reduced the virulence of F. graminearum . Furthermore, changing the redox‐modified cysteine (Cys 325 ) residue in FGSG_10089 to either serine or phenylalanine resulted in a similar phenotype to the FGSG_ 10089 knockout strain, which displayed reduced virulence and altered cell wall morphology; this underscores the importance of Cys 325 to the function of the protein. Our results indicate that NOX‐generated ROS act as intracellular signals in F. graminearum and modulate the activity of proteins affecting development and virulence in planta .

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesMeta-epidemiology (narrow)
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.007
Threshold uncertainty score1.000

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0010.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.009
GPT teacher head0.204
Teacher spread0.195 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it