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PDE6 Isoforms Are Expressed in Native Endothelium but not in Cultured Cell Lines

2016· article· en· W2892746887 on OpenAlexaff
Alexandre Blanchette, Fanny Toussaint, Chimène Charbel, Philippe Comtois, Jonathan Ledoux

Bibliographic record

VenueThe FASEB Journal · 2016
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicPhosphodiesterase function and regulation
Canadian institutionsUniversité de MontréalMontreal Heart Institute
Fundersnot available
KeywordsGene isoformCell cultureCell biologyEndotheliumBiologyMolecular biologyGeneticsGene

Abstract

fetched live from OpenAlex

Nitric oxide (NO) is a major component of endothelial regulation of vascular homeostasis.. Diffusion of NO to the underlying vascular smooth muscle cells (VSMCs) will trigger Cyclic GMP (cGMP) production through activation of soluble guanylate cyclase leading to myocyte relaxation. As a second messenger central to numerous signalling pathways, proper control of cGMP level is critical. Although modulation of cGMP levels by phosphodiesterases (PDEs) is well established in smooth muscle through PDE5, few studies have focused in cGMP regulation in endothelial cells. Amongst cGMP‐specific PDEs, PDE5 and PDE9 have been reported in VSMCs and ECs. PDE6, a retina‐restricted cGMP‐specific PDE, has considerable similarities with PDE5, including overlapping. The current study establishes the expression of PDE6 isoforms in endothelial cells and their impact on local cGMP levels. Interestingly, all PDE6 isoforms (α, β and γ) were found in endothelial cell from mouse mesenteric arteries. Complementary approaches provide compelling evidences of the expression of PDE6 isoforms at mRNA and protein levels in native endothelial cells. However, PDE6a and b were not detected in endothelial cell lines. Subcellular distribution of PDE6 and 5 was sought using confocal microscopy. Whilst PDE5‐ and PDE6γ‐associated immunofluorescence was homogeneously distributed, PDE6α and PDE6β appeared preferentially localized within the perinuclear region. Mathematical modeling demonstrated the influence of PDE localization on local cGMP concentrations. Indeed, subcellular endothelial cGMP level following a NO pulse is unsymmetrical, with the peri‐nuclear region showing very little increase in cGMP. These results strongly suggest that PDEs, especially PDE6α and PDE6β, might have an significant impact on cGMP‐mediated cellular pathways in native endothelium through the fine‐tuning of cGMP microdomains. Support or Funding Information Supported by FICM

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.009
Threshold uncertainty score0.188

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.011
GPT teacher head0.226
Teacher spread0.215 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2016
Admission routes1
Has abstractyes

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