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Record W2895856841 · doi:10.1139/cjps-2018-0189

Development of pre-breeding diploid potato germplasm displaying wide phenotypic variations as induced by ethyl methane sulfonate mutagenesis

2018· article· en· W2895856841 on OpenAlexaffvenue
Ashok Somalraju, Kaushik Ghose, David Main, Benoît Bizimungu, Bourlaye Fofana

Bibliographic record

VenueCanadian Journal of Plant Science · 2018
Typearticle
Languageen
FieldAgricultural and Biological Sciences
TopicPlant Genetic and Mutation Studies
Canadian institutionsAgriculture and Agri-Food Canada
Fundersnot available
KeywordsMethane sulfonatePloidyBiologyGermplasmPolyploidPlant breedingSolanumHabitMutagenesisGenetic variationGenetic divergenceCultivarGeneHorticultureBotanyGeneticsMutantGenetic diversity

Abstract

fetched live from OpenAlex

Mutations are the key drivers for evolution and diversification in plants. In varietal selection, sources for variation are always sought as starting breeding materials. Thus, in the absence of desired natural variations in breeding populations, targeted or random mutagenesis is applied to induce variations. Cultivated potato (Solanum tuberosum L.) is autotetraploid crop species with a narrow and highly heterozygous genetic base, and the complexity of its genome makes its genetic studies more difficult. In the current study, induced mutagenesis was performed in diploid potato using ethyl methane sulfonate (EMS) to enlarge the genetic variability for its use as pre-breeding materials in both polyploid and diploid potato breeding. As starting materials, true potato seeds were treated with 1.2% EMS for 4–6 h along with untreated seeds as controls. A large variation in terms of germination rate, plant, flower, and tuber phenotype was observed in EMS-treated plants compared with their untreated counterparts. In particular, abnormal phenotypes including twisted stem, partial and (or) completely chlorotic leaves and stems, variations in stem colour and weak-stemmed plants with lateral growth habit as well as plants with determinate growth habit were observed along with normal plant characteristics. Moreover, variations in flower colour and tuber colour, shape, and size, as well as yield potential, were observed in EMS-treated lines. The reported phenotypic characterization of EMS mutagenized diploid potato collection is to our knowledge the first in its kind and represents a premium genetic resource for potato breeding programs and plant biologists for genes functional characterization in potato.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.002
Threshold uncertainty score0.007

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0010.001
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0020.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.031
GPT teacher head0.245
Teacher spread0.214 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations9
Published2018
Admission routes2
Has abstractyes

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