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Record W2897154867 · doi:10.1111/pce.13463

Lectin AtGAL1 interacts with high‐mannose glycoform of the purple acid phosphatase AtPAP26 secreted by phosphate‐starved <i>Arabidopsis</i>

2018· article· en· W2897154867 on OpenAlexafffund
Mina Ghahremani, Joonho Park, Erin M. Anderson, Naomi J. Marty‐Howard, Robert T. Mullen, William C. Plaxton

Bibliographic record

VenuePlant Cell & Environment · 2018
Typearticle
Languageen
FieldAgricultural and Biological Sciences
TopicPlant nutrient uptake and metabolism
Canadian institutionsUniversity of GuelphQueen's University
FundersNatural Sciences and Engineering Research Council of Canada
KeywordsMannoseBiochemistryBimolecular fluorescence complementationArabidopsisPhosphataseLectinComplementationProtein-fragment complementation assayGlycosylationArabidopsis thalianaMannose 6-phosphateEnzymeAcid phosphataseBiologyChemistryMolecular biologyGeneReceptorMutant

Abstract

fetched live from OpenAlex

Abstract Among 29 predicted Arabidopsis purple acid phosphatases (PAPs), AtPAP26 functions as the principle extracellular and intracellular PAP isozyme that is upregulated to recycle and scavenge Pi during Pi‐deprivation or leaf senescence. Our companion paper documented the copurification of a secreted, high‐mannose AtPAP26‐S2 glycoform with AtGAL1 (At1g78850), a Pi starvation‐inducible (PSI), and Galanthus nivalis agglutinin‐related (mannose‐binding) and apple domain lectin. This study tests the hypothesis that AtGAL1 binds AtPAP26‐S2 to modify its enzymatic properties. Far‐western immunodot blotting established that AtGAL1 readily associates with AtPAP26‐S2 but not the low mannose AtPAP26‐S1 glycoform nor other secreted PSI PAPs (i.e., AtPAP12 or AtPAP25). Analytical gel filtration indicated that 55‐kDa AtGAL1 and AtPAP26‐S2 polypeptides associate to form a 112‐kDa heterodimer. Microscopic imaging of transiently expressed, fluorescent protein‐tagged AtGAL1, and associated bimolecular fluorescence complementation assays demonstrated that (a) like AtPAP26, AtGAL1 also localizes to lytic vacuoles of Pi‐deprived Arabidopsis and (b) both proteins interact in vivo. AtGAL1 preincubation significantly enhanced the acid phosphatase activity and thermal stability of AtPAP26‐S2 but not AtPAP26‐S1. We hypothesize that AtGAL1 plays an important role during Pi deprivation through its interaction with mannose‐rich glycans of AtPAP26‐S2 and consequent positive impact on AtPAP26‐S2 activity and stability.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesInsufficient payload (model declined to judge)
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.418
Threshold uncertainty score1.000

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.007
GPT teacher head0.156
Teacher spread0.150 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations21
Published2018
Admission routes2
Has abstractyes

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