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Record W2897915992 · doi:10.1016/j.jalz.2018.06.287

P1‐281: NONLINEAR N‐SCORE ESTIMATION FOR ESTABLISHING COGNITIVE NORMS FROM THE NATIONAL ALZHEIMER'S COORDINATING CENTER (NACC) DATASET

2018· article· en· W2897915992 on OpenAlexaff
John Kornak, Julie A. Fields, Sarah Farmer, Bradley F. Boeve, Howard J. Rosen, Adam L. Boxer, Jessica Bove, Danielle Brushaber, Giovanni Coppola, Christina Dheel, Brad C. Dickerson, Susan Dickinson, Kelley Faber, Jamie Fong, Tatiana Foroud, Leah K. Forsberg, Ralitza H. Gavrilova, Debra Gearhart, Nupur Ghoshal, Jill Goldman, Jonathan Graff‐Radford, Neill R. Graff‐Radford, Murray Grossman, Dana Haley, Hilary W. Heuer, John Hsiao, Ging‐Yuek Robin Hsiung, Edward D. Huey, David J. Irwin, David T. Jones, Lynne C. Jones, Kejal Kantarci, Anna M. Karydas, David S. Knopman, Joel H. Kramer, Walter K. Kremers, Walter A. Kukull, Maria I. Lapid, Diane Lucente, Ian R. Mackenzie, Masood Manoochehri, Bruce L. Miller, Rodney Pearlman, Leonard Petrucelli, Madeline Potter, Rosa Rademakers, Katherine Rankin, Katya Rascovsky, Pheth Sengdy, Leslie M. Shaw, Margaret Sutherland, Jeremy A. Syrjanen, Nadine Tatton, Joanne Taylor, Arthur W. Toga, John Q. Trojanowski, Sandra Weıntraub, Bonnie Wong, Zbigniew K. Wszołek

Bibliographic record

VenueAlzheimer s & Dementia · 2018
Typearticle
Languageen
FieldMedicine
TopicDementia and Cognitive Impairment Research
Canadian institutionsUniversity of British ColumbiaVancouver Coastal Health Research Institute
Fundersnot available
KeywordsStandard deviationCognitionDementiaStandard scoreStatisticsMathematicsPsychologyMedicineInternal medicinePsychiatryDisease

Abstract

fetched live from OpenAlex

An important step in determining patients with possible dementia based on cognitive scores, is to estimate the distribution of scores in cognitively normal subjects; extreme scores relative to this control distribution may indicate dementia. To date, approaches have focused on determining the distribution of z-scores for a set of normal controls, and then compared the z-scores of new subjects with that distribution. The z-score approach was extended by Shirk et al. [1] to consider linear correction for age, sex, and education. Here this approach is further extended to consider non-linear relationships between predictors and cognitive score, as well as accounting for differing standard deviation of the cognitive scores with age. The same NACC database of normal controls was used as in [1] (data were used from 29 ADCs and considered UDS visits between September 2015 and May 2017). Nonlinear shape-constrained generalized additive models (SCAMs) [2] were fit to the data separately for each cognitive outcome. SCAM fits were generated with nonlinear corrections for age and education (constrained to be monotonic), and an additive term for sex. Another SCAM was then fitted to estimate change in the standard deviation of residuals with respect to age. A lookup table was generated based on these two SCAM fits. For each value of age, education level, and sex, an adjusted z-score (n-score) was generated, using the fitted mean and standard deviation for that age, education level, and sex. The figures display an example SCAM model fit for TRAIL B. There was a clear non-linear relationship between age and TRAIL B (Figure 1). The estimated relationship between education level and TRAIL B was linear (Figure 2). Increasing standard deviation was seen with age (Figure 3). Consistent improvements were seen across different neurocognitive outcomes by allowing for such non-linear adjustment.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.007
metaresearch head score (Gemma)0.024
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Simulation or modeling · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: none
Teacher disagreement score0.029
Threshold uncertainty score0.058

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0070.024
Meta-epidemiology (narrow)0.0020.000
Meta-epidemiology (broad)0.0010.001
Bibliometrics0.0030.003
Science and technology studies0.0010.001
Scholarly communication0.0020.001
Open science0.0040.002
Research integrity0.0020.002
Insufficient payload (model declined to judge)0.0110.013

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.070
GPT teacher head0.366
Teacher spread0.296 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designSimulation or modeling
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations1
Published2018
Admission routes1
Has abstractyes

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