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Record W2899937575 · doi:10.1111/jcmm.13966

Gestational age‐dependent gene expression profiling of<scp>ATP</scp>‐binding cassette transporters in the healthy human placenta

2018· article· en· W2899937575 on OpenAlexafffund
Güínever E. Império, Mohsen Javam, Phetcharawan Lye, Andrea Constantinof, Caroline Dunk, Fernando M. Reis, Stephen J. Lye, William Gibb, Stephen G. Matthews, Tânia Maria Ortiga-Carvalho, Enrrico Bloise

Bibliographic record

VenueJournal of Cellular and Molecular Medicine · 2018
Typearticle
Languageen
FieldMedicine
TopicDrug Transport and Resistance Mechanisms
Canadian institutionsUniversity of OttawaLunenfeld-Tanenbaum Research InstituteUniversity of TorontoMount Sinai Hospital
FundersCanadian Institutes of Health ResearchConselho Nacional de Desenvolvimento Científico e TecnológicoCoordenação de Aperfeiçoamento de Pessoal de Nível SuperiorFundação Carlos Chagas Filho de Amparo à Pesquisa do Estado do Rio de JaneiroBill and Melinda Gates Foundation
KeywordsATP-binding cassette transporterSyncytiotrophoblastBiologyAbcg2Solute carrier familyPlacentaWestern blotTransporterGene expression profilingAndrologyGene expressionFetusGenePregnancyGeneticsMedicine

Abstract

fetched live from OpenAlex

Abstract The ATP ‐binding cassette ( ABC ) transporters control placental transfer of several nutrients, steroids, immunological factors, chemicals, and drugs at the maternal‐fetal interface. We and others have demonstrated a gestational age‐dependent expression pattern of two ABC transporters, P‐glycoprotein and breast cancer resistance protein throughout pregnancy. However, no reports have comprehensively elucidated the expression pattern of all 50 ABC proteins, comparing first trimester and term human placentae. We hypothesized that placental ABC transporters are expressed in a gestational‐age dependent manner in normal human pregnancy. Using the TaqMan ® Human ABC Transporter Array, we assessed the mRNA expression of all 50 ABC transporters in first (first trimester, n = 8) and third trimester (term, n = 12) human placentae and validated the resulting expression of selected ABC transporters using qPCR , Western blot and immunohistochemistry. A distinct gene expression profile of 30 ABC transporters was observed comparing first trimester vs . term placentae. Using individual qPCR in selected genes, we validated the increased expression of ABCA 1 ( P &lt; 0.01), ABCA 6 ( P &lt; 0.001), ABCA 9 ( P &lt; 0.001) and ABCC 3 ( P &lt; 0.001), as well as the decreased expression of ABCB 11 ( P &lt; 0.001) and ABCG 4 ( P &lt; 0.01) with advancing gestation. One important lipid transporter, ABCA 6, was selected to correlate protein abundance and characterize tissue localization. ABCA 6 exhibited increased protein expression towards term and was predominantly localized to syncytiotrophoblast cells. In conclusion, expression patterns of placental ABC transporters change as a function of gestational age. These changes are likely fundamental to a healthy pregnancy given the critical role that these transporters play in the regulation of steroidogenesis, immunological responses, and placental barrier function and integrity.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.024
Threshold uncertainty score0.415

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0010.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.019
GPT teacher head0.282
Teacher spread0.264 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations42
Published2018
Admission routes2
Has abstractyes

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