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Record W2900133605 · doi:10.1093/neuonc/noy148.1115

TMOD-02. DIFFUSE GLIOMATOSIS IN MOUSE MODEL OF GFAP TISSUE SPECIFIC KNOCK IN OF EGFRvIII AND KNOCK OUT OF p19 ARF

2018· article· en· W2900133605 on OpenAlexaff
Mira Li, Sameer Agnihotri, Mark R. Wilson, Julie Metcalf, Olivia Singh, Shirin Karimi, Kelly Burrell, Severa Bunda, Suganth Suppiah, Kenneth Aldape, Gelareh Zadeh

Bibliographic record

VenueNeuro-Oncology · 2018
Typearticle
Languageen
FieldMedicine
TopicHER2/EGFR in Cancer Research
Canadian institutionsUniversity of TorontoToronto Western HospitalPrincess Margaret Cancer CentreUniversity Health Network
Fundersnot available
KeywordsPathologyImmunohistochemistryBiologyNeuNSynaptophysinGliomaNestinGlial fibrillary acidic proteinGenetically modified mouseParenchymaLeptomeningesCancer researchTransgeneMedicineNeural stem cellStem cellCentral nervous systemCell biology

Abstract

fetched live from OpenAlex

We generated a transgenic mouse harboring EGFRvIII knock in and homozygous p19 ARF deletion restricted to glial cells. The mice developed diffuse glioma with some tumors showing classical histological pseudopalisading necrosis and hyper vascularity. Transgenic mice develop tumors as early as 1 month and 53% of mice die by 6 months of age. MRIs reveal that mice develop ventriculomegaly and external hydrocephalus when tumor cell infiltration grows exophytic and presents with accumulations of neoplastic cells in association with leptomeninges, in addition to the brain and spinal cord parenchyma. Immunohistochemical analysis shows a strong glial component; tumors display positive GFAP, S100 staining and negative NeuN, synaptophysin staining. Three primary cell cultures were isolated as adherent and neurospheres from mice with tumors. During in vitro culture, EGFRvIII expression was lost in 2 of 3 lines, similar to seen in humans GBMs. Results were confirmed by Western blot and RT-PCR. Intracranial injection with EGFRvIII positive lines resulted in tumors in NODSCID mice. Immunohistochemistry staining of xenografts show that cells retained EGFRvIII expression, thus reinforcing that the importance of tissue microenvironment in maintaining genomic drivers. We present phenotype and genomic profile of a new transgenic model of glioma, with a prominent phenotype of leptomeningeal spread, potentially serving as a model for this important manifestation of human tumors.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.004
Threshold uncertainty score0.013

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0000.001
Bibliometrics0.0010.000
Science and technology studies0.0000.001
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0010.002
Insufficient payload (model declined to judge)0.0040.002

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.073
GPT teacher head0.380
Teacher spread0.307 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2018
Admission routes1
Has abstractyes

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