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Record W2900266255 · doi:10.1074/jbc.ra118.005352

Coagulation factor XIIIa cross-links amyloid β into dimers and oligomers and to blood proteins

2018· article· en· W2900266255 on OpenAlexafffund
Woosuk S. Hur, Nima Mazinani, Xian Lu, Leeor S. Yefet, James R. Byrnes, Laura Ho, Ju Hun Yeon, Sam Filipenko, Alisa S. Wolberg, Wilfred A. Jefferies, Christian J. Kastrup

Bibliographic record

VenueJournal of Biological Chemistry · 2018
Typearticle
Languageen
FieldMedicine
TopicBlood properties and coagulation
Canadian institutionsCanada's Michael Smith Genome Sciences CentreUniversity of British Columbia
FundersNational Heart, Lung, and Blood InstituteBritish Columbia Knowledge Development FundNatural Sciences and Engineering Research Council of CanadaNational Science FoundationCanadian Institutes of Health ResearchMinistry of Technology, Innovation and Citizens' ServicesCanada Foundation for InnovationCentre for Blood Research, University of British ColumbiaUniversity of British ColumbiaNational Institutes of HealthGovernment of CanadaMichael Smith Health Research BC
KeywordsFactor XIIIaCerebral amyloid angiopathyFibrinChemistryAmyloid (mycology)Factor XIIITissue transglutaminasePlateletBiochemistryAntithrombinCoagulationPathologyFibrinogenImmunologyMedicineInternal medicineHeparinEnzymeDementiaDisease

Abstract

fetched live from OpenAlex

In cerebral amyloid angiopathy (CAA) and Alzheimer’s disease (AD), the amyloid β (Aβ) peptide deposits along the vascular lumen, leading to degeneration and dysfunction of surrounding tissues. Activated coagulation factor XIIIa (FXIIIa) covalently cross-links proteins in blood and vasculature, such as in blood clots and on the extracellular matrix. Although FXIIIa co-localizes with Aβ in CAA, the ability of FXIIIa to cross-link Aβ has not been demonstrated. Using Western blotting, kinetic assays, and microfluidic analyses, we show that FXIIIa covalently cross-links Aβ40 into dimers and oligomers (kcat/Km = 1.5 × 105 m−1s−1), as well as to fibrin, platelet proteins, and blood clots under flow in vitro. Aβ40 also increased the stiffness of platelet-rich plasma clots in the presence of FXIIIa. These results suggest that FXIIIa-mediated cross-linking may contribute to the formation of Aβ deposits in CAA and Alzheimer’s disease. In cerebral amyloid angiopathy (CAA) and Alzheimer’s disease (AD), the amyloid β (Aβ) peptide deposits along the vascular lumen, leading to degeneration and dysfunction of surrounding tissues. Activated coagulation factor XIIIa (FXIIIa) covalently cross-links proteins in blood and vasculature, such as in blood clots and on the extracellular matrix. Although FXIIIa co-localizes with Aβ in CAA, the ability of FXIIIa to cross-link Aβ has not been demonstrated. Using Western blotting, kinetic assays, and microfluidic analyses, we show that FXIIIa covalently cross-links Aβ40 into dimers and oligomers (kcat/Km = 1.5 × 105 m−1s−1), as well as to fibrin, platelet proteins, and blood clots under flow in vitro. Aβ40 also increased the stiffness of platelet-rich plasma clots in the presence of FXIIIa. These results suggest that FXIIIa-mediated cross-linking may contribute to the formation of Aβ deposits in CAA and Alzheimer’s disease.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.319
Threshold uncertainty score0.266

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.027
GPT teacher head0.289
Teacher spread0.263 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations24
Published2018
Admission routes2
Has abstractyes

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