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Record W2900759270 · doi:10.1101/467795

Evolution of international collaborative research efforts to develop non-Cochrane systematic reviews

2018· preprint· en· W2900759270 on OpenAlexaboutno aff
Isabel Viguera-Guerra, Juan Ruano, Macarena Aguilar-Luque, Jesús Gay-Mimbrera, Ana Montilla, José Luis Fernández-Rueda, Jesús Fernández-Chaichio, Juan Luís Sanz-Cabanillas, P. Gómez-Arias, Antonio Vélez García‐Nieto, Francisco Gómez‐García, Beatriz Isla-Tejera

Bibliographic record

VenuebioRxiv (Cold Spring Harbor Laboratory) · 2018
Typepreprint
Languageen
FieldDecision Sciences
TopicMeta-analysis and systematic reviews
Canadian institutionsnot available
Fundersnot available
KeywordsMEDLINEProtocol (science)Systematic reviewLibrary scienceMetadataData extractionScripting languageWeb of scienceCochrane LibraryMedicineWorld Wide WebComputer sciencePolitical scienceAlternative medicinePathology

Abstract

fetched live from OpenAlex

Abstract This research-on-research study describes effortsto develop non-Cochrane systematic reviews (SRs) by analysing demographical and time-course collaborations between international institutions using protocols registered in the International Prospective Register of Systematic Reviews (PROSPERO) or published in scientific journals. We have published an a priori protocol to develop this study. Protocols published in scientific journals were searched in MEDLINE/PubMed and Embase databases using the query terms ‘systematic review’[Title] AND ‘protocol’[Title] from February 2011 to December 2017. Protocols registered at PROSPERO during the same period were obtained by web scraping all non-Cochrane records with a Python script. After excluding protocols with less than 90% fulfilled or duplicated, they were classified as published ‘only in PROSPERO’, ‘only in journals’, or in both ‘journals and PROSPERO’. Results of data and metadata extraction using text-mining processes were curated by two reviewers. Datasets and R scripts are freely available to facilitate reproducibility. We obtained 20,814 protocols of non-Cochrane SRs. While ‘unique protocols’ by re-viewers’ institutions from 60 countries were the most frequent, to prepare ‘collaborative protocols’ a median of 6 (2-150) institutions were involved from 130 different countries. Ranked list of countries involved in overall protocol production were the UK, the U.S., Australia, Brazil, China, Canada, the Netherlands, Germany, and Italy. Most protocols were registered only in PROSPERO. However, the number of protocols published in scientific journals (924) or in both PROSPERO and journals (807) has progressively increased over the last three years. Syst Rev and BMJ Open published more than half of the total protocols. While most productive countries were involved in ‘unique’ and ‘collaborative’ protocols, less productive countries only participated in ‘collaborative’ protocols that were mainly published only in PROSPERO. Our results suggest that although most countries were involved in producing in solitary protocols of non-Cochrane SRs during the study period, it would be desirable to develop new strategies to promote international collaborations, especially with less productive countries.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.642
metaresearch head score (Gemma)0.801
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesMetaresearch
Consensus categoriesMetaresearch
DomainCandidate signal: Methods · Consensus signal: Methods
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: none
Teacher disagreement score0.358
Threshold uncertainty score0.442

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.6420.801
Meta-epidemiology (narrow)0.0020.004
Meta-epidemiology (broad)0.0040.005
Bibliometrics0.0540.048
Science and technology studies0.0050.006
Scholarly communication0.0180.019
Open science0.0100.034
Research integrity0.0030.004
Insufficient payload (model declined to judge)0.0100.002

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.388
GPT teacher head0.469
Teacher spread0.081 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; the direct Gemma label and the distilled Codex classifier agree on what is shown here.

Study designObservational
DomainMethods
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations2
Published2018
Admission routes1
Has abstractyes

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