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Record W2901983772 · doi:10.1002/2211-5463.12566

C/<scp>EBP</scp>β and <scp>YY</scp>1 bind and interact with Smad3 to modulate lipopolysaccharide‐induced amelotin gene transcription in mouse gingival epithelial cells

2018· article· en· W2901983772 on OpenAlex

Why this work is in the frame

A frame that forgets how it found something cannot be audited. These are the routes that admitted this work.

affAt least one author lists a Canadian institution in the pinned OpenAlex snapshot.

Bibliographic record

VenueFEBS Open Bio · 2018
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
Topicdental development and anomalies
Canadian institutionsUniversity of Toronto
FundersJapan Society for the Promotion of ScienceNihon University
KeywordsChromatin immunoprecipitationTranscription factorCcaat-enhancer-binding proteinsLuciferaseTranscription (linguistics)Molecular biologyChemistryJunctional epitheliumPromoterLipopolysaccharideCell biologyGene expressionMessenger RNAGeneNuclear proteinBiologyImmunologyEpitheliumBiochemistryGeneticsTransfection

Abstract

fetched live from OpenAlex

Junctional epithelium ( JE ) develops from reduced enamel epithelium during tooth formation and is critical for the maintenance of healthy periodontal tissue through ensuring appropriate immune responses and the rapid turnover of gingival epithelial cells. We have previously shown a relationship between inflammatory cytokines and expression of JE ‐specific genes, such as amelotin (AMTN), in gingival epithelial cells. Here, we elucidated the effects of Porphyromonas gingivalis ‐derived lipopolysaccharide ( Pg LPS ) on Amtn gene transcription and the interaction of transcription factors. To determine the molecular basis of transcriptional regulation of the Amtn gene by Pg LPS , we performed real‐time PCR and carried out luciferase assays using a mouse Amtn gene promoter linked to a luciferase reporter gene in mouse gingival epithelial GE 1 cells. Gel mobility shift and chromatin immunoprecipitation assays were performed to identify response elements bound to LPS ‐induced transcription factors. Next, we analyzed protein levels of the LPS ‐induced transcription factors and the interaction of transcription factors by western blotting and immunoprecipitation. LPS increased Amtn mRNA levels and elevated luciferase activities of constructs containing regions between −116 and −238 of the mouse Amtn gene promoter. CCAAT /enhancer‐binding protein ( C/EBP ) 1–, C/EBP2 – and Ying Yang 1 ( YY1 )–nuclear protein complexes were increased by LPS treatment. Furthermore, we identified LPS ‐modulated interactions with C/EBPβ, YY 1 and Smad3. These results demonstrate that Pg LPS regulates Amtn gene transcription via binding of C/EBPβ–Smad3 and YY 1–Smad3 complexes to C/EBP1, C/EBP2 and YY 1 response elements in the mouse Amtn gene promoter.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesMeta-epidemiology (narrow)
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.024
Threshold uncertainty score1.000

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.013
GPT teacher head0.242
Teacher spread0.229 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it