MétaCan
Menu
Back to cohort
Record W2903736148 · doi:10.1093/jas/sky404.229

PSIII-25 Dairy Data: Challenges and Opportunities.

2018· article· en· W2903736148 on OpenAlexaff
Jared Schenkels, Tarfa Hamed, Nathan Laundry, Bill Szkotnicki, Christine F. Baes

Bibliographic record

VenueJournal of Animal Science · 2018
Typearticle
Languageen
FieldAgricultural and Biological Sciences
TopicFood Supply Chain Traceability
Canadian institutionsUniversity of Guelph
Fundersnot available
KeywordsData scienceScope (computer science)Identification (biology)MetagenomicsComputer scienceSoftwareBiologyEcology

Abstract

fetched live from OpenAlex

Data on dairy animals are being generated under a wide variety of conditions (laboratory, research facilities, on farm). Each year, hundreds of research trials are carried out on the genetics, metabolism, nutrition, physiology and behavior of dairy animals. Furthermore, companies and manufacturers are producing various devices and sensors capable of automatically collecting data on farms. The capture, integration, and use of the information generated represents both a great challenge but also a tremendous opportunity to allow the sector to progress more effectively. Datasets collected in the field of dairy science are growing rapidly, and are expected to increase exponentially in size in the near future. Numerous phenotypes (immune responses, behavioral observations, nutritional information, bodily fluids such as milk, blood, rumen fluid, etc.) are being recorded. Various cost-effective information-sensing mobile devices are being implemented or will be implemented in the near future, including remote sensing, software logs, cameras, microphones, radio-frequency identification (RFID) readers and wireless sensor networks. Finally, genomic information (SNP-chip genotypes, next-generation sequence data, metagenomic and epigenetic information) are also being collected on a number of animals. The volume and the diversity in the accuracy, format, scope, structure and pattern of this data are creating important challenges. Information is compiled and kept in idiosyncratic formats by different research groups or individual farmers. Finding and valorizing existing information is complicated. This leads to overlooking potentially valuable information. Here we present the development of a standardized and curated database, which enables higher-level, more comprehensive theoretical and experimental analyses. Our work is currently focused on dairy cattle, but will be expanded to include other livestock species in the near future.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.002
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.919
Threshold uncertainty score0.459

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0020.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.001
Scholarly communication0.0000.001
Open science0.0010.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.190
GPT teacher head0.303
Teacher spread0.113 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2018
Admission routes1
Has abstractyes

Explore more

Same venueJournal of Animal ScienceSame topicFood Supply Chain TraceabilityFrench-language works237,207