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Record W2906432477 · doi:10.1111/1365-2745.13127

Contrasting patterns of plant and microbial diversity during long‐term ecosystem development

2018· article· en· W2906432477 on OpenAlexafffund
Benjamin L. Turner, Graham Zemunik, Étienne Laliberté, J. J. Drake, F. Andrew Jones, Kristin Saltonstall

Bibliographic record

VenueJournal of Ecology · 2018
Typearticle
Languageen
FieldEnvironmental Science
TopicMicrobial Community Ecology and Physiology
Canadian institutionsUniversité de Montréal
FundersNatural Sciences and Engineering Research Council of CanadaSimons FoundationSmithsonian Tropical Research InstituteUniversity of Western AustraliaNational Aeronautics and Space AdministrationAustralian Research CouncilSmithsonian Institution
KeywordsChronosequenceEcologyBiologyAcidobacteriaBiodiversityEcosystemPlant communityAbiotic componentActinobacteriaEcological succession

Abstract

fetched live from OpenAlex

Abstract Long‐term ecosystem development involves changes in plant community composition and diversity associated with pedogenesis and nutrient availability, but comparable changes in soil microbial communities remain poorly understood. In particular, it is unclear whether the diversity of plants and microbes respond to similar abiotic drivers, or become decoupled as resources change over long time‐scales. We characterized communities of archaea, bacteria and fungi in soils along a 2‐million‐year chronosequence of coastal dunes in a biodiversity hot spot in Western Australia. The chronosequence involves marked changes in soil pH and nutrient availability that drive major shifts in plant community composition and diversity as soils age. Patterns of α‐diversity for microbial groups differed along the chronosequence. Bacterial α‐diversity was greatest in intermediate‐aged soils; archaeal diversity was greater in young alkaline or intermediate‐aged soils, while fungal α‐diversity—like plant diversity—was greatest in old, strongly weathered soils where phosphorus is the limiting nutrient. Changes in microbial community composition along the chronosequence were explained primarily by the long‐term decline in soil pH , with a smaller influence of the relative abundance of plant nutrient‐acquisition strategies. However, changes between the prokaryote and fungal communities, and between fungal and plant communities, became increasingly decoupled along the chronosequence, demonstrating that the coordination of change in biological communities by abiotic drivers becomes weaker during long‐term ecosystem development. Several bacterial taxa, including DA 101 (Verrucomicrobia), “ Candidatus Solibacter” (Acidobacteria) and Gaiella (Actinobacteria), were particularly abundant on the oldest dunes, indicating that they are adapted to acquire phosphorus from extremely infertile soils. However, we cannot disentangle the influence of phosphorus from the long‐term decline in soil pH along the chronosequence. Synthesis . These results provide evidence for contrasting patterns of plant and microbial community composition and α‐diversity in response to acidification and nutrient depletion during long‐term pedogenesis.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesInsufficient payload (model declined to judge)
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.078
Threshold uncertainty score0.999

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.001
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0020.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.012
GPT teacher head0.201
Teacher spread0.189 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations64
Published2018
Admission routes2
Has abstractyes

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