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Record W2906643351 · doi:10.1128/aac.01651-18

Method-Dependent Epidemiological Cutoff Values for Detection of Triazole Resistance in <i>Candida</i> and <i>Aspergillus</i> Species for the Sensititre YeastOne Colorimetric Broth and Etest Agar Diffusion Methods

2018· article· en· W2906643351 on OpenAlexaff
Ana Espinel‐Ingroff, John Turnidge, Ana Alastruey‐Izquierdo, Françoise Botterel, Rafael Cantón, C. Castro, Yee‐Chun Chen, Yan Chen, Erja Chryssanthou, Éric Dannaoui, Guillermo García‐Effrón, Gloria M. González, Nelesh P. Govender, Jesús Guinea, Sarah Kidd, Michaela Lackner, Cornelia Lass‐Flörl, María José Linares-Sicilia, Leire López-Soria, Rindidzani E. Magobo, Teresa Peláez, Guillermo Quindós, M. A. Rodriguez-Iglesia, Maite Ruiz, F Sánchez, Maurizio Sanguinetti, Ryan K. Shields, Piotr Szweda, Anna Maria Tortorano, Nancy L. Wengenack, Simone Bramati, C. Cavanna, C. DeLuca, Maria Luisa Gelmi, Anna Grancini, Giuseppe Lombardi, Joseph Meletiadis, C. E. Negri, Marco Passera, Javier Pemán, Anna Prigitano, E. Sala, M. Tejada

Bibliographic record

VenueAntimicrobial Agents and Chemotherapy · 2018
Typearticle
Languageen
FieldMedicine
TopicAntifungal resistance and susceptibility
Canadian institutionsPublic Health Ontario
FundersNational Institute of Allergy and Infectious DiseasesUniversidad Nacional del Litoral
KeywordsEtestMicrobiologyBiologyCandida parapsilosisPosaconazoleCandida glabrataCandida kruseiCandida albicansCorpus albicansItraconazoleAntifungal

Abstract

fetched live from OpenAlex

Although the Sensititre Yeast-One (SYO) and Etest methods are widely utilized, interpretive criteria are not available for triazole susceptibility testing of Candida or Aspergillus species. We collected fluconazole, itraconazole, posaconazole, and voriconazole SYO and Etest MICs from 39 laboratories representing all continents for (method/agent-dependent) 11,171 Candida albicans , 215 C. dubliniensis , 4,418 C. glabrata species complex, 157 C. guilliermondii ( Meyerozyma guilliermondii ), 676 C. krusei ( Pichia kudriavzevii ), 298 C. lusitaniae ( Clavispora lusitaniae ), 911 C. parapsilosis sensu stricto , 3,691 C. parapsilosis species complex, 36 C. metapsilosis , 110 C. orthopsilosis , 1,854 C. tropicalis , 244 Saccharomyces cerevisiae , 1,409 Aspergillus fumigatus , 389 A. flavus , 130 A. nidulans , 233 A. niger , and 302 A. terreus complex isolates.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.005
metaresearch head score (Gemma)0.010
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.005
Threshold uncertainty score0.026

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0050.010
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0010.001
Bibliometrics0.0040.002
Science and technology studies0.0000.001
Scholarly communication0.0020.001
Open science0.0010.001
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0020.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.031
GPT teacher head0.354
Teacher spread0.323 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations71
Published2018
Admission routes1
Has abstractyes

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