MétaCan
Menu
Back to cohort

Human regulatory T cell isolation in 55 minutes using EasySep™ Releasable RapidSpheres™ (TECH2P.912)

2015· article· en· W2908142670 on OpenAlexaff
Andy I. Kokaji, Chuan Sun, Garry MacDonald, Samuel Clarke, Maureen Fairhurst, Allen Eaves, Terry E. Thomas

Bibliographic record

VenueThe Journal of Immunology · 2015
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicSingle-cell and spatial transcriptomics
Canadian institutionsTerry Fox Research InstituteBC Cancer AgencyStemcell Technologies
Fundersnot available
KeywordsFOXP3IL-2 receptorImmunomagnetic separationCell biologyIntracellularPhenotypeT cellBiologyNegative selectionInterleukin-7 receptorPeripheral blood mononuclear cellImmunologyMolecular biologyChemistryIn vitroImmune systemBiochemistryGene

Abstract

fetched live from OpenAlex

Abstract The preferred marker for identifying regulatory T cells (Tregs) is FOXP3 but its intracellular localization currently precludes it from being used for isolating viable cells. Human FOXP3+ Tregs are characterized as CD4+ T cells expressing high levels of CD25 and low levels of CD127. We have developed a novel immunomagnetic approach for the isolation of magnetic-particle-free human Tregs from PBMCs in as little as 55 minutes. This offers a vast improvement in speed over other immunomagnetic Treg isolation approaches, which typically require more than 2 hours. The standard approach for isolating Tregs combines CD4+ T cell negative enrichment followed by CD25 positive selection. By contrast, our novel approach is to first perform the CD25 positive selection step with EasySep™ Releasable RapidSpheres™, a new type of magnetic particle that can be rapidly released from the isolated cells with a no-incubation, no-wash protocol performed at room temperature. Subsequent depletion of CD127high and non-CD4+ T cells is achieved by negative enrichment with EasySep™ Dextran RapidSpheres™. Starting with 5x107 PBMCs, a purity of 87.6% ± 3.1% and recovery of 2.7x105± 8.2x104 Tregs (CD4+CD127lowCD25+FOXP3+) can be achieved (n=6). This is the first EasySep™ kit to incorporate the EasySep™ Releasable RapidSpheres™ and it exemplifies the potential of this technology for use in rapidly isolating magnetic particle-free cell populations possessing complex cell surface phenotypes.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Methods · Consensus signal: none
Teacher disagreement score0.004
Threshold uncertainty score0.012

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0010.000
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0040.004

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.029
GPT teacher head0.246
Teacher spread0.217 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreMethods

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2015
Admission routes1
Has abstractyes

Explore more

Same venueThe Journal of ImmunologySame topicSingle-cell and spatial transcriptomicsFrench-language works237,207