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Record W2909425558 · doi:10.1080/23802359.2018.1544864

The complete mitochondrial genome of the kelp fly <i>Fucellia costalis</i> (Diptera: Anthomyiidae) from Pacific Grove, California

2019· article· en· W2909425558 on OpenAlexaboutno aff
Ivan D. Agudelo, Karina Almanza, Maria Guadalupe Altamirano Manriquez, Paulina Andrade, Eduardo Anguiano, S. Ayala, Dominic Barrios, Lyric Batistiana, Kruthi Battar, Daisy Noemi Benavides, R. Contreras Chávez, Yosselin Cuevas, Neovid C. Cuevas, Rogelio Garcia, Maria E. Diaz, Jamileth Figueroa, Martin Flores, Aaron Galvan, Yazmín Esperanza López García, Christian Gonzalez Balcazar, Gabriel Zárate Guerrero, Maiya R. Harper, T. García Hernández, Jeffrey Y. Honda, Jeffery R. Hughey, Victoria N. Hutchins, Raul Rodrigo Lazaro Olivera, Evelyn Macias Reyes, Isela M. Magallon, Adrian J. Maldonado, Dayana Maravillo Sanchez, Lauryn Martinez, Cristhian Mendoza, Antonio Gómez Mendoza, Jason Montoya, Prashant P. Naidu, Alexis Novoa, Natalie M. Ortega, David Ortíz, Anastacia M. Paredes, Eduardo Perez Solis, Abbey A. Plascencia, Alejandra N. Ponce, Alicia E. Ramirez, María F. Ramirez, Sergio Rodríguez, Angélica Gutiérrez-Sánchez, Nia N. Serrano, Francisco D. Solano, Daniel P. Soto, Alicia Steinhardt, Maria O. Taveras Dina, Alejandra L. Tong, Brenda J. Torresillas, Rolando T. Valdez, Paola Vidales Villicana, Adrian Zamora, Frances Wong

Bibliographic record

VenueMitochondrial DNA Part B · 2019
Typearticle
Languageen
FieldAgricultural and Biological Sciences
TopicInsect behavior and control techniques
Canadian institutionsnot available
Fundersnot available
KeywordsAnthomyiidaeBiologyPhylogenetic treeSubfamilyEvolutionary biologyKelpSyntenyGeneBotanyGenomeGeneticsPEST analysis

Abstract

fetched live from OpenAlex

Genomic analysis of the kelp fly Fucellia costalis (Family Anthomyiidae) from Asilomar beach, Pacific Grove, California, resulted in the assembly of its complete mitogenome. The mitogenome is 16,175 bp in length, A + T biased (78.1%), contains 37 genes, a large 1356 bp control region, and has a high-level of gene synteny to other Muscoidea. Phylogenetic analysis of F. costalis fully resolves it in a clade with two members of the Anthomyiidae, Delia platura (8.2% pairwise genetic distance) and D. antiqua (9.2% distance), in a sister position to Scathophaga stercoraria (7.8% distance) from the Scathophagidae. The phylogenetic position and genetic distances of F. costalis support the continued recognition of the subfamily Fucellinae. This identification and data extends the distributional range of F. costalis northward from California to Vancouver Island, Canada.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.051
Threshold uncertainty score0.101

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.001
Science and technology studies0.0010.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.011
GPT teacher head0.190
Teacher spread0.179 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations1
Published2019
Admission routes1
Has abstractyes

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Same venueMitochondrial DNA Part BSame topicInsect behavior and control techniquesFrench-language works237,207