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Record W2909958730 · doi:10.5539/jas.v11n2p408

Gene Expressions Analysis of Seed Physiological Quality in Soybean Cultivars

2019· article· en· W2909958730 on OpenAlexvenueno aff
Alexana Baldoni, Edila Vilella de Resende Von Pinho, Heloísa Oliveira dos Santos, Thaís Lima Marques, Rucyan Walace Pereira

Bibliographic record

VenueJournal of Agricultural Science · 2019
Typearticle
Languageen
FieldAgricultural and Biological Sciences
TopicSoybean genetics and cultivation
Canadian institutionsnot available
FundersFundação de Amparo à Pesquisa do Estado de Minas GeraisConselho Nacional de Desenvolvimento Científico e TecnológicoCoordenação de Aperfeiçoamento de Pessoal de Nível Superior
KeywordsCultivarBiologyAlcohol dehydrogenaseIsocitrate lyaseMalate dehydrogenaseSuperoxide dismutaseGene expressionGeneGerminationIsozymeCatalaseHorticultureBotanyEnzymeBiochemistryGlyoxylate cycle

Abstract

fetched live from OpenAlex

Soybean seed production with high physiological quality is important for ensuring populations of recommended plants for each cultivar. It is also known that there is genetic variability for this characteristic among the soybean cultivars. The objective was to study the genes expressionof protein and gene transcript involved in the physiological quality of soybean seeds. The seeds of CD 206 and CD 201 cultivars were classified as high quality while Savana and Emgopa 316 cultivars were classified as low quality by germination and vigor tests. Physiological, enzymatic and transcripts analysis were held in seeds of each cultivar during two harvest seasons, R8 and R8 + 15 days; at protein level the alcohol dehydrogenase isoenzyme systems (ADH), phosphoglucoisomerase (PGI), superoxide dismutase (SOD), catalase (CAT), malate dehydrogenase (MDH) and isocitrate lyase (ICL). The PCR technique in real time (qRT-PCR) was used for transcritome studies for quantitative gene expression analysis. The method used was the comparative Ct considering the relative expression levels in relation to cultivar of high quality CD 201. It is concluded that there is higher enzymes expression involved in respiration, alcohol dehydrogenase (ADH), malate dehydrogenase (MDH) and phosphoglucoisomerase (PGI), in seeds with high physiological quality, especially when harvesting is delayed. The proteomic and transcriptomic profiles related to the genes involved in free radicals removing systems in soybeans varies among cultivars and the season of seed harvest.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.837
Threshold uncertainty score0.156

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0010.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.003
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0010.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.033
GPT teacher head0.278
Teacher spread0.246 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations2
Published2019
Admission routes1
Has abstractyes

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