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Record W2910693157 · doi:10.3389/fpls.2018.01998

A New Role for SAG12 Cysteine Protease in Roots of Arabidopsis thaliana

2019· article· en· W2910693157 on OpenAlexfundno aff
Maxence James, Céline Masclaux‐Daubresse, Anne Marmagne, Marianne Azzopardi, Philippe Laîné, Didier Goux, Philippe Étienne, Jacques Trouverie

Bibliographic record

VenueFrontiers in Plant Science · 2019
Typearticle
Languageen
FieldAgricultural and Biological Sciences
TopicPlant nutrient uptake and metabolism
Canadian institutionsnot available
FundersInstitute of GeneticsRégion NormandieUniversité de Caen NormandieInstitut National de la Recherche Agronomique
KeywordsArabidopsisArabidopsis thalianaCysteine proteaseBiologyCysteineBotanyMutantBiochemistryEnzymeGene

Abstract

fetched live from OpenAlex

Recently it was shown that the SAG12 cysteine protease might be important for nitrogen (N) allocation to the seeds in Arabidopsis thaliana. Compared to the wild type Col cultivated under low nitrogen (LN) conditions, a decrease in yield and N content in the seeds was observed in the SAG12 knockout Arabidopsis mutant (sag12). As no associated leaf senescence phenotype was observed, a possible involvement of SAG12 in the remobilization of N from organs other than the leaves was proposed. The fact that better root N uptake in sag12 could also supplement N mobilization to the seed was explored. Root architecture, N uptake capacity and 15N partitioning were then analyzed in both genotypes (Col and sag12) cultivated under high nitrogen (HN) and LN conditions. No difference in root architecture and root N uptake capacity was observed between sag12 and Col under HN or LN conditions. However, when compared to Col under LN conditions, the 15N partitioning showed that the accumulation of 15N in the roots of sag12 was detrimental to the 15N allocated to seeds. The sequestration of N in the root of sag12 under LN was associated with an increase in the N protein content of roots and a significant decrease in the cysteine protease activity in the roots. Accordingly, we reveal here that SAG12 is strongly expressed in the root stele at the reproductive stage and especially when plants are cultivated under LN conditions. Taken together, these results suggest a new role for SAG12 as a crucial cysteine protease involved in the root remobilization of N to ensure seed filling and to sustain yield when plants are facing low nitrogen availability.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.440
Threshold uncertainty score0.185

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0010.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.001
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.010
GPT teacher head0.201
Teacher spread0.190 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations37
Published2019
Admission routes1
Has abstractyes

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