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Record W2911363089 · doi:10.1093/ecco-jcc/jjy222.294

P170 Diagnostic criteria for IBD subtype classification: a multi-centre validation cohort

2019· article· en· W2911363089 on OpenAlexaff
Micol Sonnino, M Matar, Amit Assa, R Lev Zion, Eyal Shteyer, Anne M. Griffiths, Dan Turner, Oren Ledder

Bibliographic record

VenueJournal of Crohn s and Colitis · 2019
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicInflammatory Bowel Disease
Canadian institutionsHospital for Sick Children
Fundersnot available
KeywordsMedicineUlcerative colitisCohortInflammatory bowel diseaseInternal medicineRetrospective cohort studyPancolitisCrohn's diseaseGastroenterologyDiseaseColonoscopyColorectal cancerCancer

Abstract

fetched live from OpenAlex

IBD-unclassified (IBD-U) is a diagnosis on the spectrum between Crohn's disease (CD) and ulcerative colitis (UC) with very low agreement between physicians and a wide heterogeneity in the diagnosis rate of IBDU across sites. The PIBD-classes criteria were thus developed to standardise the classification of children with IBD as having CD, colonic CD, IBD-U, atypical UC and UC. We aimed to provide further validation of the PIBD-classes criteria on real-world data of paediatric IBD. Multi-centre retrospective longitudinal study of children (2–18 years) diagnosed with IBD with at least 1 year follow-up and available gastroscopy and ileocolonoscopy. Clinical, radiologic, endoscopic and histological data were recorded as well as the 23 items required for the PIBD-classes criteria, and revised diagnosis at last follow-up. In total, 184 children were included (age at diagnosis 13 ± 3 years, 55% males) of whom 122 (66%) were diagnosed by the clinician with CD, 17 (9%) with IBD-U and 45 (25%) with UC. By the PIBD-classes criteria, 121 (66%) had CD (of whom 5 (3% of the entire cohort) had colonic CD), 22 (12%) had IBDU and 41 (22%) UC (of whom 14 (8% of the entire cohort) had atypical UC). There was high agreement between clinician-assigned and PIBD-classes-generated classification for CD (93%; 8 patients moved to IBD-U) and for UC (84%; 6 moved to IBD-U and one to CD). Of the 17 children classified as IBD-U, 9 (53%) were re-classified by the PIBD-classes criteria: 2 as atypical UC, 1 as UC, and 6 as CD. The initial clinician’s diagnosis was revised at the last follow-up in 10 patients, five of whom supported the classification of the PIBD-classes (four IBD-U patients, two reclassified as CD, two reclassified as UC, 1 UC patient reclassified as IBD-U). The PIBD-classes algorithm is a useful, standardised tool to facilitate accurate classification of IBD subtypes and the average rate of the disease subtypes remain as the clinicians’ classification. In cases of change of IBD class during follow-up the PIBD-classes criteria accurately predicted the final allocation in half of patients. Application of the PIBD-classes algorithm should be considered to improve reliability and consistency of IBD subtype classification between physicians and centres.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.003
metaresearch head score (Gemma)0.006
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.007
Threshold uncertainty score0.015

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0030.006
Meta-epidemiology (narrow)0.0010.001
Meta-epidemiology (broad)0.0010.001
Bibliometrics0.0010.001
Science and technology studies0.0010.001
Scholarly communication0.0010.001
Open science0.0010.001
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0020.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.014
GPT teacher head0.272
Teacher spread0.258 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2019
Admission routes1
Has abstractyes

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