MétaCan
Menu
Back to cohort
Record W2912787829 · doi:10.2135/cropsci2018.05.0348

Mapping QTL Associated with Stripe Rust, Leaf Rust, and Leaf Spotting in a Canadian Spring Wheat Population

2019· article· en· W2912787829 on OpenAlexafffundabout
Darcy H. Bemister, Kassa Semagn, Muhammad Iqbal, Harpinder Randhawa, Stephen E. Strelkov, Dean Spaner

Bibliographic record

VenueCrop Science · 2019
Typearticle
Languageen
FieldAgricultural and Biological Sciences
TopicWheat and Barley Genetics and Pathology
Canadian institutionsAgriculture and Agri-Food CanadaAlberta Ministry of Agriculture and ForestryAgriculture Food and Rural DevelopmentUniversity of Alberta
FundersGenome PrairieAlberta InnovatesAgriculture and Agri-Food CanadaWestern Grains Research FoundationUniversity of AlbertaMinistry of Agriculture - SaskatchewanGenome CanadaGenome AlbertaAlberta Crop Industry Development Fund
KeywordsQuantitative trait locusBiologyRust (programming language)Leaf spotAgronomyPopulationCultivarResistance (ecology)Plant disease resistanceGeneticsGene

Abstract

fetched live from OpenAlex

Stripe rust, leaf rust, and the leaf spot complex are economically important diseases of wheat ( Triticum aestivum L.) in western Canada, and genetic host resistance is the most successful management strategy. This study was conducted to identify quantitative trait loci (QTL) associated with these diseases and to provide wheat breeders with sources of potential disease resistance genes. A total of 208 recombinant inbred lines derived from a cross between Canadian spring wheat cultivars ‘Peace’ and ‘Carberry’ were evaluated from 2014 to 2017 in stripe rust, leaf rust, and leaf spot nurseries in Alberta and British Columbia. All lines were genotyped with sequencing‐based Diversity Arrays Technology (DArTseq) markers. Using the least square means of the combined environments, two stripe rust resistance QTL, two leaf rust resistance QTL, and three leaf spot resistance QTL were identified. The stripe rust QTL were located on chromosomes 3A and 4B, the leaf rust QTL were located on chromosomes 4A and 3D, and the leaf spot QTL were located on 2A, 4B and 7D. The stripe rust resistance QTL on 4B, contributed by ‘Carberry’, was previously identified in other studies using a population derived from ‘Carberry’. Results from this study suggest that ‘Carberry’ may be an attractive parental source for breeders to enhance resistance against stripe rust and leaf spot with minor resistance alleles.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.251
Threshold uncertainty score0.895

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0010.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.001
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.015
GPT teacher head0.208
Teacher spread0.193 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations18
Published2019
Admission routes3
Has abstractyes

Explore more

Same venueCrop ScienceSame topicWheat and Barley Genetics and PathologyFrench-language works237,207