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Record W2921840664 · doi:10.1093/jcag/gwz006.005

A6 TREATMENT TRIAL RESULTS FROM COMMUNITY H. PYLORI PROJECTS IN ARCTIC CANADA

2019· article· en· W2921840664 on OpenAlexaffabout
Sander Veldhuyzen van Zanten, Amy L. Morse, J. L. Morse, S. Girgis, Ali Assi, Katharine Fagan-Garcia, Janis Geary, Karen J. Goodman

Bibliographic record

VenueJournal of the Canadian Association of Gastroenterology · 2019
Typearticle
Languageen
FieldAgricultural and Biological Sciences
TopicPlant Physiology and Cultivation Studies
Canadian institutionsUniversity of Alberta
Fundersnot available
KeywordsClarithromycinAmoxicillinMetronidazoleMedicineHelicobacter pyloriLevofloxacinInternal medicineProton-pump inhibitorAntibioticsMicrobiology

Abstract

fetched live from OpenAlex

Helicobacter pylori (Hp) infection is a health concern in Arctic Canada, where prevalence of Hp and gastric cancer rates are high. The Canadian North Helicobacter pylori (CANHelp) Working Group conducts community projects to address public concerns, describe the disease burden, and inform regional health policy. Projects were launched projects during 2007–2017 in Aklavik, Tuktoyaktuk, Fort McPherson, and Inuvik in the Northwest Territories and Old Crow, Teslin, Ross River, Carmacks, and Pelly Crossing in Yukon. To provide summary data on success of anti-Hp therapies in the NWT and Yukon In each community, a planning committee guided the research design and conduct. Projects included UBT screening, upper GI endoscopy, treatment, and knowledge exchange. All Hp-positive participants ≥15 years old could enroll in a series of randomized treatment trials to one of the following anti-Hp therapies: - CA: 10-day combination of proton pump inhibitor (PPI), clarithromycin and amoxicillin - Sequential therapy (ST) 10 day: PPI and amoxicillin for days 1–5, followed by PPI, clarithromycin and metronidazole for days 6–10 - BMT quadruple (BMT): 10–14 day bismuth quadruple therapy with PPI, bismuth, metronidazole, and tetracycline - CAM 14 day quadruple therapy with PPI, clarithromycin, amoxicillin, and metronidazole - AL: 14 day PPI, amoxicillin and levofloxacin Treatment adjustments: CA therapy was discontinued in 2008 after initial results showed poor effectiveness. Based on ST results and new Canadian guidelines ST was replaced by CAM in 2015 and treatment duration became 14 days. Treatment success is defined as a negative UBT at >=10 weeks post treatment. To date, of 1421 community Hp project participants, 1305 were tested for Hp by UBT (positivity=52%), 398 had endoscopy with gastric biopsy, 268 enrolled in the treatment trial, and 225 had a post-treatment UBT. In 5 patients the UBT was equivocal and these were excluded. Of trial participants with a follow-up UBT, the proportion with treatment success was: PPI-CA 62% (29/47; 95%CI 46–75%); ST 72% (70/97; 95%CI 62–81%); BMT 92% (56/61; 95%CI 82–97%) and 100% (15/15; 95%CI 82–100%) of those randomized to CAM. Of 68 participants treated outside the clinical trial with a follow-up UBT, the proportion with treatment success was: PPI-CA 41% (7/17; 95%CI 18–67%); ST 47% (8/17; 95%CI 23–72%); BMT 92% (15/18; 95%CI 59–96%), CAM 67% (2/3; 95%CI 9–99%)and AL 3/3(100%, 95%CI 37–100%), In 10 patients the treatment was unknown. While treatment success estimates from this treatment trial in Canadian Arctic communities are somewhat imprecise, results demonstrate superiority of bismuth based quadruple and non-bismuth quadruple (CAM) therapies to sequential or triple therapy. Compliance with follow up UBT testing is suboptimal. CIHRInuvialuit Regional Corporation, Alberta Innovates Health Solutions, ArcticNet

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.006
metaresearch head score (Gemma)0.018
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Non-randomized trial · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.166
Threshold uncertainty score0.334

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0060.018
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0020.004
Bibliometrics0.0010.002
Science and technology studies0.0020.001
Scholarly communication0.0020.001
Open science0.0010.001
Research integrity0.0020.002
Insufficient payload (model declined to judge)0.0120.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.023
GPT teacher head0.203
Teacher spread0.181 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designNon-randomized trial
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2019
Admission routes2
Has abstractyes

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