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Record W2922271458 · doi:10.1093/jcag/gwz006.135

A136 A LONGITUDINAL STUDY EXAMINING FODMAP INTAKE AND THE METABOLOME IN IBS PATIENTS

2019· article· en· W2922271458 on OpenAlexaff
Caroline J. Tuck, Sean Bennet, S. Rolland, David E. Reed, Cintya D. Lopez Lopez, Josue O. Jaramillo Polanco, Nestor N. Jiménez-Vargas, Céline Morissette, Michael Beyak, Mark J. Ropeleski, Ammar Hassanzadeh Keshteli, Karen Madsen, Přemysl Berčík, Stephen Vanner

Bibliographic record

VenueJournal of the Canadian Association of Gastroenterology · 2019
Typearticle
Languageen
FieldMedicine
TopicDiet and metabolism studies
Canadian institutionsMcMaster UniversityUniversity of AlbertaQueen's University
Fundersnot available
KeywordsMedicineIrritable bowel syndromeMetabolomeInternal medicineRandomized controlled trialUrinePsychological interventionQuality of life (healthcare)GastroenterologyPhysical therapyPsychiatry

Abstract

fetched live from OpenAlex

The low FODMAP (fermentable oligo-, di-, mono-saccharides and polyols) diet has proven efficacy to reduce symptoms of irritable bowel syndrome (IBS). Whilst some mechanisms of action are known, our previous work has suggested that FODMAP-microbiota interactions change the metabolome which may modulate pain signaling in the gut, which may also be important. The aim of this randomized cross-over study was to further characterize the effect of low and high FODMAP intake on symptoms and the metabolome. In this longitudinal IBS (Rome IV) study, patients underwent 4 assessments: two non-intervention periods including a 1-week ‘baseline’ and 3-week ‘run-in’, followed by two dietary interventions, a low- and high-FODMAP diet, given in random order for 3-weeks each. Patients were provided detailed dietary instruction by a specialized dietitian at the start of each diet and advised that either diet may have therapeutic potential. At the end of each of the 4 periods, patients completed a 7-day food diary, the IBS Severity Scoring System (IBS-SSS), the quality-of-life (QOL) Nepean Dyspepsia index (SF-NDI), and provided fasting urine samples. Identification and quantification of 117 urine metabolites was performed using LC-MS. Questionnaires were analyzed by one-way ANOVA with Bonferroni, and metabolomics by multivariate analysis. Ten female patients completed the study for this interim analysis (7 IBS-D, 2 IBS-C, 1 IBS-M). Dietary data showed good compliance with the interventions (Table 1). Symptoms were stable between the non-intervention time points, significantly reduced with the low FODMAP diet (p=0.00), and a trend was seen between the low and high FODMAP diets (p=0.07). The urinary metabolite levels in patients on the low FODMAP diet differed significantly from baseline, the main metabolites responsible for the change were phosphatidylcholines (e.g. PC40:2AA, PC36:0AA, LYSOC18:2). There was also a shift in the metabolome between the low and high FODMAP diets, the most significantly changed metabolites were sphingomyelins (SM 20:2), phosphatidylcholines (LYSOC20:4, PC40:6AE), and acylcarnitines (C18:1OH). This study showed that IBS symptoms were stable over 3 weeks and lowering dietary FODMAPs significantly improved symptoms. The diets caused a shift in the metabolome, but greater numbers of patients are needed to determine the complete metabolomic profile and their potential physiological significance in symptom responses. Table 1 CIHRCanadian Nutrition Society

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.001
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.002
Threshold uncertainty score0.008

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0010.001
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.001
Bibliometrics0.0000.000
Science and technology studies0.0010.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0020.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.015
GPT teacher head0.241
Teacher spread0.226 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2019
Admission routes1
Has abstractyes

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