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Record W2925251483 · doi:10.1139/cjps-2018-0188

Characterization and expression analysis of <i>GPAT</i> gene family in maize

2019· article· en· W2925251483 on OpenAlexvenueno aff
Xiaoxuan Xu, Bowei Yan, Zhao Ying, Feng Wang, Xunchao Zhao, Lin He, Jingyu Xu, Changjiang Zhao

Bibliographic record

VenueCanadian Journal of Plant Science · 2019
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicLipid metabolism and biosynthesis
Canadian institutionsnot available
Fundersnot available
KeywordsGeneBiologyGene expressionGenetics

Abstract

fetched live from OpenAlex

Glycerol-3-phosphate acyltransferase (GPAT) catalyzes the initial step of glycerolipids biosynthesis and contributes to oil production, membrane stabilization, and stress responses in plants. In major field crops, little information on the GPAT gene family and their potential stress-related functions were available. In this study, 15 GPAT gene family members were identified from the maize genome and designated as ZmGPAT1–ZmGPAT14 and ZMS1. The ZmGPAT proteins contained 371–557 amino acids and had a molecular weight between 42.7 and 61.2 kDa. Phylogenetic analysis revealed that ZmGPATs fell into four clusters. All 15 ZmGPAT proteins possessed conserved PlsC/LPLAT (phosphate acyltransferases/lysophospholipid acyltransferases) domains and featured multiple acyltransferase motifs. The expression profiles of ZmGPAT genes were different in various tissues of maize and the elevated expression of several ZmGPAT genes occurred at early seed developmental stages. In response to environmental stresses, differential expression of ZmGPATs had been observed, highlighted by the significant induction of transcripts accumulation of some ZmGPATs under cold treatment. This study will help to better understand the potential roles of GPAT in oil production and development and abiotic stress responses in field crops.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.003
Threshold uncertainty score0.006

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.005
GPT teacher head0.188
Teacher spread0.183 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations5
Published2019
Admission routes1
Has abstractyes

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Same venueCanadian Journal of Plant ScienceSame topicLipid metabolism and biosynthesisFrench-language works237,207