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Record W2938588715 · doi:10.21105/joss.01272

NeuroDSP: A package for neural digital signal processing

2019· article· en· W2938588715 on OpenAlexfundno aff
Scott R. Cole, Thomas Donoghue, Richard Gao, Bradley Voytek

Bibliographic record

VenueThe Journal of Open Source Software · 2019
Typearticle
Languageen
FieldNeuroscience
TopicNeural dynamics and brain function
Canadian institutionsnot available
FundersNatural Sciences and Engineering Research Council of CanadaUniversity of California, San DiegoNational Science Foundation
KeywordsComputer scienceSignal processingDigital signal processingComputer graphics (images)Computer hardware

Abstract

fetched live from OpenAlex

Populations of neurons exhibit time-varying fluctuations in their aggregate activity. These data are often collected using common magneto-and electrophysiological methods, such as magneto or electroencephalography (M/EEG), intracranial EEG (iEEG) or electrocorticography (ECoG), and local field potential (LFP) recordings While there are existing Python tools for digital signal processing (DSP), such as scipy.signal, neural data exhibit specific properties that warrant specialized analysis tools focused on idiosyncrasies of neural data. Features of interest in neural data include periodic properties-such as band-limited oscillations NeuroDSP is a package specifically designed to be used by neuroscientists for analyzing neural time series data, in particular for examing their time-varying properties related to oscillatory and 1/f-like components.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.004
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: Not applicable
GenreCandidate signal: Software · Consensus signal: none
Teacher disagreement score0.111
Threshold uncertainty score0.371

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0010.004
Meta-epidemiology (narrow)0.0020.001
Meta-epidemiology (broad)0.0010.001
Bibliometrics0.0010.001
Science and technology studies0.0000.000
Scholarly communication0.0010.001
Open science0.0020.002
Research integrity0.0010.002
Insufficient payload (model declined to judge)0.1110.051

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.032
GPT teacher head0.280
Teacher spread0.247 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designNot applicable
Domainnot available
GenreSoftware

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations88
Published2019
Admission routes1
Has abstractyes

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