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Dysbiosis of the Gut Microbiome in Lung Cancer

2019· article· en· 244 citations· W2939306314 on OpenAlex· 10.3389/fcimb.2019.00112

Why is this work in the frame?

A frame that forgets how it found something cannot be audited. These are the routes that admitted this work.

Canadian affiliationAn author listed a Canadian institution. This is the only route the usual frame has.

Full frame distilled prediction

Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

Candidate categories
none
Consensus categories
none
Domain
Candidate signal: noneConsensus signal: none
Study design
Candidate signal: Bench or experimentalConsensus signal: Bench or experimental
Genre
Candidate signal: EmpiricalConsensus signal: Empirical
Teacher disagreement score
0.230
Threshold uncertainty score
0.431
Validation status
machine_predicted_unvalidated · codex-gemma-dda1882f352a

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Opus teacher head0.003
GPT teacher head0.220
Teacher spread
0.217 · how far apart the two teachers sit on this one work
Validation status
score_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Abstract

Dear Editor: We wish to submit a manuscript entitled “Dysbiosis of the gut microbiome in lung cancer ” to Frontiers in Cellular and Infection Microbiology, Microbiome in Health and Disease section, for your consideration to publish as a Research Article. In this study, we examined the gut microbiome between 30 lung cancer patients and 30 healthy controls via next generation sequencing of 16S rDNA to uncover potential biomarkers for early diagnosis and targeted intervention. Previous analyses of the microbe-lung cancer relationship have been focused on lung microbiome. To our knowledge, this is the first study of lung cancer from the perspective of gut microbiome. Our findings support the hypothesis of an lung cancer-specific compositional structure of gut bacterial populations. Our work suggests that the dysbiosis of the gut microbiome in lung cancer as reflected by reduced abundance of Actinobacteria and Bifidobacterium and elevated levels of Enterococcus had facilitated the development of lung cancer and may help develop novel strategies for early prevention and targeted intervention against lung cancer. The authors claim that none of the materials in the paper has been published or is under consideration for publication elsewhere. Thank you very much for your consideration and we look forward to hearing from you soon. Yours Sincerely He Zhuang and Shu-Lin Liu Genomics Research Center Harbin Medical University 157 Baojian Road Harbin, 150081 China

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

The record

Venue
Frontiers in Cellular and Infection Microbiology
Topic
Gut microbiota and health
Field
Biochemistry, Genetics and Molecular Biology
Canadian institutions
University of Calgary
Funders
not available
Keywords
DysbiosisMicrobiomeActinobacteriaBifidobacteriumBiologyGut floraLung cancerPhylumCancerPathogenesisColorectal cancerImmunologyMicrobiologyMedicineInternal medicineBacteria16S ribosomal RNABioinformaticsGeneticsLactobacillus
Has abstract in OpenAlex
yes