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Record W2941282533 · doi:10.1186/s12917-019-1794-z

Prion protein polymorphisms associated with reduced CWD susceptibility limit peripheral PrPCWD deposition in orally infected white-tailed deer

2019· article· en· W2941282533 on OpenAlexafffund
Alicia Otero, Camilo Duque Velásquez, Chad Johnson, Allen Herbst, Rosa Bolea, Juan José Badiola, Judd M. Aiken, Debbie McKenzie

Bibliographic record

VenueBMC Veterinary Research · 2019
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicPrion Diseases and Protein Misfolding
Canadian institutionsUniversity of Alberta
FundersEuropean Social FundAlberta Prion Research InstituteGenome AlbertaGenome Canada
KeywordsChronic wasting diseasePRNPBiologyGenotypePeripheralPrion proteinAlleleDiseaseVirologyPathologyGeneticsMedicineInternal medicineGene

Abstract

fetched live from OpenAlex

Chronic wasting disease (CWD) is a prion disease affecting members of the Cervidae family. PrP C primary structures play a key role in CWD susceptibility resulting in extended incubation periods and regulating the propagation of CWD strains. We analyzed the distribution of abnormal prion protein (PrP CWD ) aggregates in brain and peripheral organs from orally inoculated white-tailed deer expressing four different PRNP genotypes: Q95G96/Q95G96 (wt/wt), S96/wt, H95/wt and H95/S96 to determine if there are substantial differences in the deposition pattern of PrP CWD between different PRNP genotypes. Although we detected differences in certain brain areas, globally, the different genotypes showed similar PrP CWD deposition patterns in the brain. However, we found that clinically affected deer expressing H95 PrP C , despite having the longest survival periods, presented less PrP CWD immunoreactivity in particular peripheral organs. In addition, no PrP CWD was detected in skeletal muscle of any of the deer. Our data suggest that expression of H95-PrP C limits peripheral accumulation of PrP CWD as detected by immunohistochemistry. Conversely, infected S96/wt and wt/wt deer presented with similar PrP CWD peripheral distribution at terminal stage of disease, suggesting that the S96-PrP C allele, although delaying CWD progression, does not completely limit the peripheral accumulation of the infectious agent.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.001
Threshold uncertainty score0.004

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.049
GPT teacher head0.326
Teacher spread0.277 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations49
Published2019
Admission routes2
Has abstractyes

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