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Record W2941922482 · doi:10.1093/neuonc/noz036.204

MEDU-46. SONIC HEDGEHOG SPEEDS UP DNA REPLICATION AND CAUSES CANCER-INITIATING MUTATIONS

2019· article· en· W2941922482 on OpenAlexaff
Lukas Tamayo-Orrego, David Gallo, Amandine Bemmo, Sushmetha Mohan, Samer Salameh, Frédéric Racicot, Grant W. Brown, Frédéric Charron

Bibliographic record

VenueNeuro-Oncology · 2019
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicHedgehog Signaling Pathway Studies
Canadian institutionsUniversity of TorontoMcGill UniversityUniversité de MontréalMontreal Clinical Research Institute
Fundersnot available
KeywordsSonic hedgehogBiologyDNA damageCancer researchGenome instabilityDNA repairDNA replicationPTCH1GeneticsDNACell biologyGene

Abstract

fetched live from OpenAlex

Cancer is a multi-stage disease caused by sequential mutations; however, the molecular mechanism that generates cancer-initiating mutations is not well understood. Using the developing cerebellum as a model system, here we show the molecular mechanism of tumor initiation in Sonic hedgehog medulloblastoma (SHH-MB), a common subtype of the most frequent pediatric brain tumor. The most common initiating event of SHH-MB is Ptch1 loss of heterozygosity (LOH), which occurs in cerebellar granule cell progenitors (GCPs) and leads to preneoplasia formation. Since GCPs proliferate in response to Shh, we tested whether the normal proliferative effects of Shh can lead to genomic instability and DNA lesions responsible for Ptch1 LOH in the SHH-MB cell-of-origin. We found that Shh profoundly alters DNA replication dynamics in GCPs, leading to DNA damage, formation of DNA breaks in S-phase and hyper-recombination. Shh led to DNA helicase loading and activation, resulting in high levels of replication origin firing. Shh-dependent origin firing was required for Shh-induced DNA damage and recombination. Moreover, reducing origin firing decreased recombination and tumor initiation in a pre-clinical model of MB. These results show that reduction of Shh-dependent, DNA replication-associated DNA damage in tumor-prone Ptch1+/- GCPs before cancer initiation is capable of preventing MB-initiating mutations. Thus, we demonstrate that a developmental mitogen can cause cancer-initiating mutations through an increase in origin firing, and attenuating origin firing can prevent cancer initiation.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.228
Threshold uncertainty score0.759

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.034
GPT teacher head0.330
Teacher spread0.296 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2019
Admission routes1
Has abstractyes

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