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Record W2942257464 · doi:10.1139/cjfas-2018-0271

Early warning: detection of exotic coho salmon (<i>Oncorhynchus kisutch</i>) by environmental DNA and evidence of establishment at the extreme south of Patagonia

2019· article· en· W2942257464 on OpenAlexvenueno aff
Tomás Chalde, Cristina Nardi, Daniel A. Fernández

Bibliographic record

VenueCanadian Journal of Fisheries and Aquatic Sciences · 2019
Typearticle
Languageen
FieldEnvironmental Science
TopicEnvironmental DNA in Biodiversity Studies
Canadian institutionsnot available
Fundersnot available
KeywordsOncorhynchusJuvenileBiologyFisheryChinook windAquacultureMitochondrial DNAEcologyFish <Actinopterygii>

Abstract

fetched live from OpenAlex

The global expansion of aquaculture is a constant propagule pressure that enables the establishment of exotic species in freshwater and marine environments. Here, we provide the first report on the presence of exotic coho salmon (Oncorhynchus kisutch) at the extreme south of Patagonia, in the island of Tierra del Fuego (TDF). During the last 6 years, 43 juvenile coho salmon were captured along the Beagle Channel, while one adult was captured in fresh water. Scale analysis showed that migration from fresh water as smolt would occur during their first winter of life. Mitochondrial DNA analyses revealed two haplotypes previously reported in North America and a new haplotype not reported before. We developed an environmental DNA assay for detecting coho salmon DNA from fresh water, obtaining positive results in three rivers. Additionally, one of these rivers was monitored monthly for a year, and we detected coho salmon DNA over 7 months, revealing the probable occurrence of coho salmon juveniles in fresh water. These results suggest the potential establishment of self-sustaining populations of coho salmon in TDF.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.019
Threshold uncertainty score0.039

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.021
GPT teacher head0.184
Teacher spread0.163 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations16
Published2019
Admission routes1
Has abstractyes

Explore more

Same venueCanadian Journal of Fisheries and Aquatic Sciences→Same topicEnvironmental DNA in Biodiversity Studies→French-language works237,207→