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Record W2943550262 · doi:10.5539/jas.v11n6p519

Molecular Characterization of Isolates of Fusarium spp. Associated With Wilt in Capsicum spp.

2019· article· en· W2943550262 on OpenAlexvenueno aff
Isabela Vera dos Anjos, Suelene S. de Melo, Thiago Alexandre Santana Gílio, Jessé P. Kreitlow, Sandra M. A. da S. Neves, Kelly Lana Araújo, Milson Evaldo Serafim, Leonarda Grillo Neves

Bibliographic record

VenueJournal of Agricultural Science · 2019
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicPlant Pathogens and Fungal Diseases
Canadian institutionsnot available
Fundersnot available
KeywordsBiologyFusariumPolymerase chain reactionInternal transcribed spacerFusarium solaniRibosomal DNABotanyGenusDNA extractionRibosomal RNAPhylogeneticsGeneticsGene

Abstract

fetched live from OpenAlex

Fusarium is a diverse and heterogeneous fungi genus. Its wide genetic variability and similarity in morphological characteristics hinder the identification of species of this genus. Identifying Fusarium species is difficult due to the genus. Several molecular methods have been useful for differentiating these species, and the amplification of internal transcribed spacer (ITS) regions of the fungus ribosomal DNA has been successfully used, since ITS are preserved regions of the DNA that assists in distinguishing species. The objective of this work was to collect and characterize isolates of Fusarium spp. associated with wilt symptoms in Capsicum spp. in the biomes of the state of Mato Grosso, Brazil. Were collected tissue samples of plants with wilt symptoms. The DNAs of the Fusarium spp. found were extracted, and subjected to polymerase chain reaction, using the primers ITS1 (5’TCCGTAGGTGAACCTGCGG-3’) and ITS4 (5’-TCCTCCGCTTATTGATATGC-3’). Subsequently, the sequencing was performed. The resulting sequences were, five Fusarium species were found F. solani, F. oxysporum, F. equiseti, F. incarnatum, F. chlamydosporum, predominating F. solani and F. equiseti.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.001
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.003
Threshold uncertainty score0.006

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.001
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.001
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.004
GPT teacher head0.192
Teacher spread0.188 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations4
Published2019
Admission routes1
Has abstractyes

Explore more

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